Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq379 125 2e-23 >seq379 Length=19898295 Score = 125 bits (138), Expect = 2e-23 Identities = 266/394 (68%), Gaps = 16/394 (4%) Strand=Plus/Plus Query 253997 CGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCT 254056 |||||| || ||||||| | ||||||| ||||| || ||||| ||| || || || Sbjct 15018626 CGACCTGCCGAATTTGCTGCTGTACGGTCCGCCCGGTACCGGCAAAACGAGCACGATTCT 15018685 Query 254057 GGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116 |||| ||||| ||||| ||||| | || | |||||| | |||||||| || Sbjct 15018686 GGCGGCCGCCCGCCAGCTGTTTGGCGACATGTTCAAG---GAGCGCATCCTCGAGCTTAA 15018742 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGAT 254176 ||| || ||||| || || | | ||| ||||| |||| | ||||| ||| | || | Sbjct 15018743 CGCATCGGACGACCGAGGAATTGCCGTGATCCGCAACAAAGTGAAGACGTTCGCGCAGCT 15018802 Query 254177 GTCGATTTC--GT---CGTTCC------AACCCGGCTGTCCGCCTTTCAAGCTCGTGATC 254225 | || || || ||| || || |||||| || ||||| |||| ||| Sbjct 15018803 GACGGCCAGCGGTACCCGATCCGATGGGAAACC--CTGTCCACCGTTCAAAATCGTCATC 15018860 Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285 || |||||||||||| | ||||| || || ||| |||| | || || || |||||| Sbjct 15018861 CTCGACGAGGCGGACGCGATGACTCACGCGGCCCAGGCCGCGTTGCGTCGCACAATGGAG 15018920 Query 254286 ACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCC 254345 | | | || || || ||| ||||||||||||||||||| ||||||| Sbjct 15018921 AAAGAAACGAAAACCACCCGGTTCTGCTTGGTGTGCAACTACGTGTCACGCATCATCGAA 15018980 Query 254346 CCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| | | || || ||| ||||||| || |||| Sbjct 15018981 CCGATCACATCGCGCTGCACCAAGTTCCGTTTCA 15019014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073748982837888