Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq490 120 2e-22 >seq490 Length=13136524 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||||||| ||| || |||| ||| Sbjct 5732921 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732862 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| |||||||| |||| ||||| || || || || | |||||||||||| Sbjct 5732861 AGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732802 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||||| || || |||||| Sbjct 5732801 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732742 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 5732741 CCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||||||| ||| || |||| ||| Sbjct 5732693 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732634 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || || || || | |||||||||||| Sbjct 5732633 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732574 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||||| || || |||||| Sbjct 5732573 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732514 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| ||||| Sbjct 5732513 CCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||||||| ||| || |||| ||| Sbjct 5731119 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5731060 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || || || || | |||||||||||| Sbjct 5731059 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5731000 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||||| || || |||||| Sbjct 5730999 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5730940 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||||| ||||| ||||| Sbjct 5730939 CCAGTCAACGTCTTCACGAAGATCTGCAT 5730911 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||| |||||||||||| ||| || |||| ||| Sbjct 5732465 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732406 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || || || || | |||||||||||| Sbjct 5732405 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732346 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| ||| ||||||| || || |||||| Sbjct 5732345 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732286 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTG 45333 || ||||| |||||||| ||||| || Sbjct 5732285 CCAGTCAGCGTCTTCACGAAGATCTG 5732260 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| || | | |||| || || ||| ||||||||| || |||||||| | Sbjct 10198965 CCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGAC 10199024 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || | || ||||| || ||||||||||| |||| ||||| || || ||||| Sbjct 10199025 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 10199084 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| ||| ||| || ||| || | | | ||||| |||||| Sbjct 10199085 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCACT 10199144 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||| || || ||||| || ||||| ||||| || |||||||||||| Sbjct 10199145 TCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATG 10199192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395069104236586