Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq302 250 4e-61 seq391 233 3e-56 seq335 210 3e-49 seq379 158 2e-33 >seq302 Length=5740867 Score = 250 bits (276), Expect = 4e-61 Identities = 508/743 (68%), Gaps = 36/743 (5%) Strand=Plus/Minus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 |||| | || ||||| ||||| || |||||||| || || || |||||| || | || | Sbjct 73572 AGGCGGAAGCTTCCTTCTGGACCGTGGAAGAGGTGGACCTCTCGAAGGACATGAAGGACT 73513 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGT----TTATATCGCACATTTTGGCCTTC 125153 |||| ||| ||||| | ||||||| || | || |||||| | |||||||| Sbjct 73512 GGGAT--TCG-----CTGAAGCCGAGCGAGCGTCACTTCATCTCGCACGTGCTGGCCTTC 73460 Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213 ||||||| ||| || || ||||| ||||| |||||| || || ||| || ||| || Sbjct 73459 TTTGCCGCCTCGGACGGTATCGTGAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTG 73400 Query 125214 ACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTC 125272 | | |||| ||| ||||| ||||| || || || ||| |||||||||||| Sbjct 73399 CAGGTGACGGAGGC-TCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAG 73341 Query 125273 GGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAACGTAAACACAT 125329 || |||||||| ||||| |||| |||||||||||| || | | || | || Sbjct 73340 CGAGATGTACTCGCTGCTGATCGACACGTACATTCGCGACCCGAAGGAGCGGGAGTAC-- 73283 Query 125330 GCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCG 125389 || || ||||| ||||| ||| | |||| | || ||||| | |||| | | Sbjct 73282 -CTGTTCAACGCGATCGAAACGCTCCCGTGCGTGAAGAAGAAGGCCGACTGGGCGCTGAA 73224 Query 125390 GTGGA--TCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTA 125447 |||| |||| | | || | | | | | ||| || ||||||| ||||| ||||| Sbjct 73223 CTGGATCTCGAGCAAG-CAGGCCAAC-TTTGGCGAGCGAGTGGTGGCGTTCGCTGCCGTC 73166 Query 125448 GAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTC 125507 |||||||||||||| || || || ||||||||||| ||||| |||||||| || || Sbjct 73165 GAGGGCATCTTCTTCAGTGGAAGCTTCGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTG 73106 Query 125508 ATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGAC 125567 ||||| || |||||| | |||||||| || || || |||||||| || |||||||| Sbjct 73105 ATGCCGGGTCTGACGTTCTCGAACGAGTTGATCTCGCGTGACGAGGGACTGCACTGTGAT 73046 Query 125568 TTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAG-ATCCAGCGATGAAAA 125626 |||||| || |||| || ||||||| |||||| | || ||| | | Sbjct 73045 TTTGCCTGCCTGATGTTCCG---CTATCTG--------GTGCAGAAGCCGACGAAGGAGC 72997 Query 125627 G-GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCC 125685 | || | | || | |||||| || || || || ||||| || || | | | Sbjct 72996 GCGTGACGGAAATCATCCGCGATGCGGTCGCAATCGAGCAGGAGTTCCTGACGAAGGCGC 72937 Query 125686 TACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGG 125745 | ||||| ||| | || ||||||||| | || |||| ||||||| ||||| |||| Sbjct 72936 TCCCGGTTGATATGCTCGGTATGAACTGCGATCTGATGTCGCAGTACATCGAGTTCGTGG 72877 Query 125746 CAGATCGTCTACTGTACGAGTTG 125768 | ||||| | ||| |||||| Sbjct 72876 CCGATCGGTTGCTGCTGGAGTTG 72854 >seq391 Length=2819257 Score = 233 bits (258), Expect = 3e-56 Identities = 379/535 (71%), Gaps = 14/535 (3%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAAT--GTCACGATACGTTACACAGGGCGGCAATA 96888 || || ||||| | ||||||| |||| | |||| ||||| ||||||||||||| Sbjct 156078 GTACCGATGCTGCGCGTGTACAA--CAATACGGCACGGTACGTCGATCAGGGCGGCAATA 156135 Query 96889 AACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTA 96948 | |||||||| || | ||| ||||| |||| || ||||||| || || ||||| ||| Sbjct 156136 AGCGGCCAGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGATGTGTTTGAGTTTT 156195 Query 96949 TCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCAC 97008 | || || |||||| | ||| || |||| || || |||||| ||||||| || | Sbjct 156196 TAGATCTGAAGAAAAACACCGGCAAGGAGGAGGTGCGCGCAAGGGACATGTTTTACGCGC 156255 Query 97009 TCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC-TGGAGCCTAATG 97067 ||||| | || ||| |||||||| ||||||| | | || | || ||||| | ||| Sbjct 156256 TCTGGATACCGGATCTGTTCATGCAGCGCGTGGA-GGCGAACGAAACGTGGAGTTTGATG 156314 Query 97068 TGCCC---CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAG 97124 ||||| ||||| || ||||| || |||||| |||||||||||||| ||| | Sbjct 156315 TGCCCGCACGACT-GT--CCCGGATTGGCCGATTCGTGGGGCGAAGAGTTCGAGAAGTTG 156371 Query 97125 TACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAACTGTGG 97184 ||||||| || || | |||||||| | | | | | || | || | || |||||| Sbjct 156372 TACACGGGTTATGAAAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCGCAGGATCTGTGG 156431 Query 97185 AAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACC 97244 || ||| | | ||||| ||||| || |||||||| || |||||||| | Sbjct 156432 TTTGCGATCATCGAATCCCAGGTGGAGACGGGCGTACCGTACATGCTGTACAAGGA-CGC 156490 Query 97245 GTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCAC 97303 ||| |||||||| |||||||||| || | |||||||||||| |||| || || ||||| Sbjct 156491 GTGCAATCGCAAAAGCAACCAACAAAACATCGGCACCATCAAGTGCTCTAACCTTTGCAC 156550 Query 97304 GGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCG 97358 || ||||| |||||| | || |||||| ||| || ||| ||||| ||| Sbjct 156551 CGAGATTGTGGAGTACTCGTCGAAGGACGAAGTGGCGGTGTGCAACCTGGCCTCG 156605 Score = 149 bits (164), Expect = 9e-31 Identities = 330/490 (67%), Gaps = 4/490 (1%) Strand=Plus/Plus Query 97774 ACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGT 97833 ||||| || | ||||| ||||| | || |||||||| |||||| | || | ||| | | Sbjct 157033 ACGGTGTGCGCAACTCACTGCTGCTCGCGCCGATGCCGACGGCTTCGACGGCACAAATTT 157092 Query 97834 TTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGT 97893 | ||||| || || || || |||| |||||| ||| | ||| | | ||| | || Sbjct 157093 TGGGCAACAACGAGTCGTTCGAGCCGTACACGTCCAACGTCTACAACCGGCGCGTTCTGT 157152 Query 97894 CTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGGAACG-GCTCAATCTG 97952 | || |||||||| || ||| ||| || | | || | || | || | |||| Sbjct 157153 CGGGCGAGTTTCAGGTGGTGAACCACCACCTGAT-CAAGGATCTGACCACGCACGGTCTG 157211 Query 97953 TGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATT-AC 98011 ||| ||||||| ||| | ||| || | |||| || || || || ||||| | Sbjct 157212 TGGGACGATGATATGAAGAACACAATCCTGGCCCACAACGGTTCGATCCAGAACATCGAA 157271 Query 98012 CATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACTGTCTGGGAGATTCCGACCAAGAC 98071 || || ||| | || ||||| | ||||| || || ||||||||| || || || Sbjct 157272 CAA-ATACCGAAGGAAGTGCGCGATCTGTACAAAACGGTTTGGGAGATTTCGGTGAAAAC 157330 Query 98072 GCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCT 98131 | ||| | ||||| |||||| | |||| | ||| || ||| || |||||||| | Sbjct 157331 GTGCATCCAGATGGCAGCCGACCGGGGTGCGTTCATCGATCAGTCGCAGTCGTTCAACAT 157390 Query 98132 GTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATACACTTTTACGCATGGAACAA 98191 |||| || || || | |||| | |||| || || ||||| |||| ||||| | Sbjct 157391 CCACGTGGCGGAACCGAACTACGGCAAGCTGACGTCAATGCACTTCCACGCGTGGAAGAT 157450 Query 98192 GGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAATGCCATACCATT 98251 |||||| ||||| |||||||||||| || | || ||| | ||| ||||| || | || Sbjct 157451 GGGCCTGAAGACTGGCATGTACTATTTGCGCACCAAGCCCGCCGTAAATGCGATCCAGTT 157510 Query 98252 TACGGTGGAC 98261 ||||| ||| Sbjct 157511 CACGGTCGAC 157520 Score = 86.0 bits (94), Expect = 9e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 134254 TGTGCGATGCGATCACCCTTTGACACTACAAAGTCGTCATCGGAATGGTTAAAGAGGACC 134313 || ||||| ||||||||||| ||| ||||||| | ||||| ||||| || || || Sbjct 1161911 TGCGCGATACGATCACCCTTCTTCACCTCAAAGTCCGCCTCGGAGTGGTTGAACAGCACG 1161970 Query 134314 ACTCCAATGTTTCCAGTATAGTCGCGGTCCACGACACCGGCTCCGACGTCGATTCCGTAC 134373 || || | |||||| ||||| ||| ||||| ||||| || || ||||| || | Sbjct 1161971 ACGCCGACATTTCCACGGTAGTCCTCGTCGACGACGCCGGCACCCACATCGATGAAGTTC 1162030 Query 134374 TTGGCTGCCAGTTTGGATCGCGGAGCAATCCTACCGTAGCAACCTTCCGG 134423 || | ||||| |||||| || || | | ||||| || |||||||| Sbjct 1162031 TTCACCGCCAGCCCGGATCGTGGTGCCACACGTCCGTAACAGCCTTCCGG 1162080 >seq335 Length=4578965 Score = 210 bits (232), Expect = 3e-49 Identities = 393/571 (69%), Gaps = 16/571 (3%) Strand=Plus/Minus Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161 |||||| | |||||||| ||||| || || || | ||| ||||||||||| || ||| | Sbjct 2089105 TTGCGGAAGAAGATGACGCCGGCGCGCGGCCCGCGGAGCGTCTTGTGCGTCGTCGTGCTG 2089046 Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCA-AT 127220 || | ||| ||||| || || || |||| | |||| | || ||||| | || Sbjct 2089045 ACGACGTCCGCGTACTCGAACGGCGACGGGATGATGCCGGCCGCGACCA-GCCCGGAGAT 2088987 Query 127221 GTGTGCAATATCGGCCATCAGCAAGGAGCCGG-CTGCATCGGCAATCTCTCGGAATCGTC 127279 ||| || || || || | ||| | | ||| ||| ||| | ||||| ||||| || Sbjct 2088986 GTGCGCCATGTCCGCGAACAGGTACGCCCCGTTCTGGTTCG-CGATCTCCCGGAAGCGCT 2088928 Query 127280 TATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATA 127339 | ||||| | || || | ||||| | ||||||| ||||| | | | || ||||| | Sbjct 2088927 TGTAGTCGAGGCAGCGCGAGTAGCACGAGATGCCGGCGATGATCACCTTCGGCTTGAACA 2088868 Query 127340 GATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGT 127399 | ||| |||| | | ||| | ||||||| || || ||| || |||||||||| Sbjct 2088867 GCCGGGCCGTCTCCTCCATCTTGTCGTAGTCGATCAGCCCGGTCACCGGGTCCACCTTGT 2088808 Query 127400 ACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACA-------CGT-TGCG----GAATC 127447 |||||||||| ||||| |||| || || ||||| | ||| |||| ||| | Sbjct 2088807 ACGGCATGCTCTCGAAGAAGATGGACGTGGCGGAGATTTTCTTCGTCTGCGTCATGAAGC 2088748 Query 127448 CGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAA 127507 |||||||||||||||| ||||| || || ||||| |||||||| | |||||||| | | Sbjct 2088747 CGTGCGTCAGGTGGCCCCCGTCTGGGAGGTCGAGCCCCATGATGCGCCCGTGCGGCTCGA 2088688 Query 127508 CGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTC 127567 | | | ||||||||||| |||||||| ||| || |||||||| || || | Sbjct 2088687 TCAGTGCCGTGTACACGGCGAAGTTGGCGGGCGAACCGGAGTACGGCTGCACGTTGCAGC 2088628 Query 127568 CCCATTCGGACTCGTTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCGA 127627 |||| || | | | | | |||| ||| |||| |||||| ||||| |||| Sbjct 2088627 CCCACTCCGCCGGATCGAGCCGGTACGCCTCGAGCGCACGCTTCTGTGCCAGCAGCTCGA 2088568 Query 127628 TGCGATCGATAAACTCGTTACCACCATAGTA 127658 | ||||| ||||| || ||||| ||||| Sbjct 2088567 TCTCGTCGATGAACTCATTGCCACCGTAGTA 2088537 >seq379 Length=19898295 Score = 158 bits (174), Expect = 2e-33 Identities = 351/526 (67%), Gaps = 3/526 (1%) Strand=Plus/Plus Query 49797 CCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCGAGC 49856 |||| || || | ||||| || ||||||||||| |||||| ||| ||||| | |||| Sbjct 11802490 CCGTCGAACCGTCGATGTTCCTGTACATGATGGCGTTCATGCTGACGTCGGTCGTGGAGC 11802549 Query 49857 AGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGTGCC 49916 ||||||| | | ||| ||||||||||||| |||| || ||||||| || || || | Sbjct 11802550 AGGCGTTCTTTCTCTACAAAGCGTGCACCGTTGACCACGGGTACTCGCACGACGTCTGTC 11802609 Query 49917 ACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACATTTC 49976 |||||| |||||| | |||||||| || | || ||| ||| ||| || || | Sbjct 11802610 TCAACATCGAGCAGTACCAGGACATCAAGAAGCAGGTGCAGGTGACGACGTCCACCTTCC 11802669 Query 49977 ATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAGGAT 50036 | ||||||||| | || | | |||||||| | | |||| | ||||| || Sbjct 11802670 ACCAGTGGAACAACATCGCGATGTACGTGGTGCCGATCGTGCTGGCGCTGTTCCTCGGTG 11802729 Query 50037 CCTATAGTGATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAAACTCT 50096 | | || ||||||| | ||| | ||| || |||||| || || || Sbjct 11802730 CGTGGTCCGACCGGCGCGGCCGTAAGCTGCCCCTCATACTCGGACTCTGCGGGAAGCTGG 11802789 Query 50097 TTTTCTCGGCAATGCTAACCGTAAACAGTCTCA---AGAGCTGGCCCGTAGAGTATATAA 50153 | | ||||| ||| | || |||| | || | ||||| || ||||| || | Sbjct 11802790 TGTACTCGGTGATGATCGTGGTGAACACGCGCATGCCGTCGTGGCCGGTGGAGTACATCA 11802849 Query 50154 TCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGCAGCGT 50213 ||||||| || || | ||||| | | ||||| || || | | || ||||| | | Sbjct 11802850 TCTACACCGCCACCATCCCGAGCGTGTTGACCGGGGCGGACATTGCGATCTTCGCGTCCT 11802909 Query 50214 GCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGGGCATCT 50273 |||| || ||||| | || | |||| |||||| | |||||||| || | || Sbjct 11802910 GCTTCGCGTACATCTCGGACATCACGACGGTGGAGGAGCGCACGCTGCGCATCACGATAC 11802969 Query 50274 TGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGG 50319 |||| || ||||||||||||||||| | ||| || ||| |||| Sbjct 11802970 TGGACGCGACGTACCTGAGCACGATGCCGATCGGGGTCGCGCTCGG 11803015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741047472738160