Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq490 114 3e-20 seq668 86.0 1e-11 >seq490 Length=13136524 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| |||| || | || || ||||| | || || || ||||| ||||| ||||| || Sbjct 10198964 TCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGA 10199023 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || | || ||||| || || ||||| || || || || | ||| ||||| ||||| Sbjct 10199024 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 10199083 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| |||||||||||||| || || || || || | || || || || || Sbjct 10199084 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCAC 10199143 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| || || || || || || || || ||||| Sbjct 10199144 TTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191 >seq668 Length=488849 Score = 86.0 bits (94), Expect = 1e-11 Identities = 175/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 165095 ACCGATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAG 165154 |||||| |||| |||||| | ||| | || | |||||| || | ||||| ||| Sbjct 176692 ACCGATCAGGACGAATGGTCGTCCTGGCAGAAGCGAGGCGATCCGGTACTGCATATCGAG 176751 Query 165155 CTAAGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAG 165214 || | | ||||| ||| || | ||||||| || | || |||||| | |||||| Sbjct 176752 CTCGGTAAGTGGGCCGATCTGCTCGTGATAGCGCCGCTCGATGCGAACAGTCTGGCGAAG 176811 Query 165215 ATAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATATTAAT 165274 || || | || | || | || ||| | ||||| | || ||| || | Sbjct 176812 ATGGCGAGTGGGCTGTGCGACAATTTGCTGCTGTGTACGACCCGCGCCTGGGATCCGGAC 176871 Query 165275 AAACCTTTACTTTTCTGTCCAGCTATGAATACACTTATGTGGGAACATCCTATTACTGAG 165334 ||||| || || ||||||||||| ||||| || | ||||||| ||||||| || || | | Sbjct 176872 AAACCGTTGCTCTTCTGTCCAGCCATGAACACGCGTATGTGGCAACATCCGATCACCGGG 176931 Query 165335 CAGCATATAGAAACTCTTAA 165354 ||||| || || || || || Sbjct 176932 CAGCAGATCGAGACGCTAAA 176951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151379723598328