Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq391 136 4e-27
>seq391
Length=2819257
Score = 136 bits (150), Expect = 4e-27
Identities = 190/261 (73%), Gaps = 8/261 (3%)
Strand=Plus/Plus
Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTC-GTCCAAG-CGGTTAACCTCTT 5297
|| ||||| |||||||| | ||||||| || ||||| ||| | ||| || |||||
Sbjct 1161818 CCAGTAGATCCGAATCCTCCGGCGCCGCGCTCCGTGTCCGTCAGCGACGG--AAGCTCTT 1161875
Query 5298 GAACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAA 5357
| | || | | ||| |||||| || | ||| || || | || |||||||| |
Sbjct 1161876 CCAAGTCCGGATAGGCTATCTTTTCGCAGATGAACTGCGCGATACGATCACCCTTCTTCA 1161935
Query 5358 CCTCAAAGTCGCTGTTTCCGA--AGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTC 5415
||||||||| | | || || ||| |||||||| || |||||||| || ||||||||
Sbjct 1161936 CCTCAAAGT--CCGCCTCGGAGTGGTTGAACAGCACGACGCCGACATTTCCACGGTAGTC 1161993
Query 5416 TTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGG 5475
||||||| ||||| || ||||| ||||| |||| || ||||| || ||||| |||||
Sbjct 1161994 CTCGTCGACGACGCCGGCACCCACATCGATGAAGTTCTTCACCGCCAGCCCGGATCGTGG 1162053
Query 5476 TGCTATGCGTCCGTAGCAACC 5496
||| | |||||||| || ||
Sbjct 1162054 TGCCACACGTCCGTAACAGCC 1162074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447743314349920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |