Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq391 136 4e-27 >seq391 Length=2819257 Score = 136 bits (150), Expect = 4e-27 Identities = 190/261 (73%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTC-GTCCAAG-CGGTTAACCTCTT 5297 || ||||| |||||||| | ||||||| || ||||| ||| | ||| || ||||| Sbjct 1161818 CCAGTAGATCCGAATCCTCCGGCGCCGCGCTCCGTGTCCGTCAGCGACGG--AAGCTCTT 1161875 Query 5298 GAACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAA 5357 | | || | | ||| |||||| || | ||| || || | || |||||||| | Sbjct 1161876 CCAAGTCCGGATAGGCTATCTTTTCGCAGATGAACTGCGCGATACGATCACCCTTCTTCA 1161935 Query 5358 CCTCAAAGTCGCTGTTTCCGA--AGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTC 5415 ||||||||| | | || || ||| |||||||| || |||||||| || |||||||| Sbjct 1161936 CCTCAAAGT--CCGCCTCGGAGTGGTTGAACAGCACGACGCCGACATTTCCACGGTAGTC 1161993 Query 5416 TTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGG 5475 ||||||| ||||| || ||||| ||||| |||| || ||||| || ||||| ||||| Sbjct 1161994 CTCGTCGACGACGCCGGCACCCACATCGATGAAGTTCTTCACCGCCAGCCCGGATCGTGG 1162053 Query 5476 TGCTATGCGTCCGTAGCAACC 5496 ||| | |||||||| || || Sbjct 1162054 TGCCACACGTCCGTAACAGCC 1162074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447743314349920