Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq391 147 2e-30 >seq391 Length=2819257 Score = 147 bits (162), Expect = 2e-30 Identities = 198/276 (72%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||| || || |||||||| || ||||| | ||||| || ||| ||| | |||||| Sbjct 1161817 GCCAGTAGATCCGAATCCTCCGGCGCCGCGCTCCGTGTCCGTCAGCGACGGAAGCTCTTC 1161876 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || || || | || |||||||| | |||||| || || || ||| |||| || Sbjct 1161877 CAAGTCCGGATAGGCTATCTTTTCGCAGATGAACTGCGCGATACGATCACCCTTCTTCAC 1161936 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 ||| || || | | | |||||||||||| ||||| || || || |||||||| | Sbjct 1161937 CTCAAAGTCCGCCTCGGAGTGGTTGAACAGCACGACGCCGACATTTCCACGGTAGTCCTC 1161996 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| | ||||| || ||||| |||||||||| ||| |||||||| ||||| || || || Sbjct 1161997 GTCGACGACGCCGGCACCCACATCGATGAAGTTCTTCACCGCCAGCCCGGATCGTGGTGC 1162056 Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTG 5778 ||| || ||||| || || || || | ||| | ||| Sbjct 1162057 CACACGTCCGTAACAGCCTTCCGGCACCTGCACCTG 1162092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430047764529392