Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq113 156 4e-33 seq391 100 3e-16 >seq113 Length=5901441 Score = 156 bits (172), Expect = 4e-33 Identities = 219/305 (72%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 ||||||| || || || ||||| || || |||| ||| | |||| || || | Sbjct 1291623 AAACGCACGACGACCTGTGGAACGCGGCCCAGCTGCAGATGGTGCGGGAGGCCAAGATGC 1291682 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| |||||||||||||| || ||||| || |||||||| | ||| |||||| Sbjct 1291683 ACGGCTTCCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGACGCGAACGCCCGAGG 1291742 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 ||||||||||| | || || || |||||| | |||||||| ||||| ||||| || | Sbjct 1291743 AGGCGCTCGAGACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGACCCGA 1291802 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTC-TTCACGATAGAAGCTTTTTAGAA 71908 |||| || ||||||||||||||| | | |||| | | ||||| ||| || Sbjct 1291803 ACGGGTACGTCGGTTGCATGTGG-TCGATCGCGGGCATCCACGACCAGGGCTGGAAGGAG 1291861 Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968 || | | || || ||||||||||| ||||| | || ||| | ||||||||| | Sbjct 1291862 CGCGACATATTCGGCAAAATTCGCTACATGAACTACGACGGCTGCAAGCGCAAGTTCGAC 1291921 Query 71969 GTGAA 71973 ||||| Sbjct 1291922 GTGAA 1291926 >seq391 Length=2819257 Score = 100 bits (110), Expect = 3e-16 Identities = 327/500 (65%), Gaps = 15/500 (3%) Strand=Plus/Minus Query 147447 AGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTA 147506 || || || || ||||| ||| |||||||||||||||| | || ||| | || Sbjct 157183 AGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGAC 157124 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || |||||||||||||||||||||| || | ||| ||||| |||| ||||||||||| Sbjct 157123 GTGTACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATC 157064 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGC-TCGTC 147625 || | || | ||| ||||| | ||||| | || || | | ||| ||| ||| | Sbjct 157063 GGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCG-C 157005 Query 147626 CCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACA 147685 ||| ||||| || || ||| | | | ||||||| || |||| | || || Sbjct 157004 CCAATTCCACAGGTCCGTCGGTACCT---TGTTCCACATGTCGTACTGCAGAATACCCTT 156948 Query 147686 ACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACT 147745 || | || ||| ||||| | ||||| | ||| | | | || | ||| | Sbjct 156947 GCTCACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCGCAGC- 156889 Query 147746 TTGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCC 147803 | ||| || |||||||| || || || || | |||| | ||| | | | ||| Sbjct 156888 -TAGCTTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGCGCC 156830 Query 147804 TCTTGGCTGTCGTAGGGCATATCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCG 147863 || || ||||| || | ||| | | ||||| ||| || | || || | ||| Sbjct 156829 TCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCG 156770 Query 147864 ATACCGATGGGTCGGTGTCTGAAATTCGA-TGCTTGAGCGCT--AGCCAACGGATAAAAA 147920 |||||||| || ||||| | | ||||| |||| |||| | || ||| || || Sbjct 156769 ATACCGATCGGACGGTGGCGCATGTTCGAGCGCTT---CGCTTCCGGCACCGGGTAGAAG 156713 Query 147921 TTCAAGTCGATAATTTTATT 147940 |||| ||||||||| || || Sbjct 156712 TTCACGTCGATAATCTTGTT 156693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478654825167520