Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq391 192 5e-44 seq712 132 4e-26 seq934 122 7e-23 seq490 111 1e-19 >seq391 Length=2819257 Score = 192 bits (212), Expect = 5e-44 Identities = 1003/1579 (64%), Gaps = 40/1579 (3%) Strand=Plus/Minus Query 128809 GCCGGCTTGGTGCGCAAATAGTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATG 128868 || |||||||||||||||||||||||||| || |||| || | ||||| | ||| | | Sbjct 157492 GCGGGCTTGGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 157433 Query 128869 TGAATCGTGGTCAACAATGCGTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTT 128928 || || | |||| | ||||| | |||| || || || || || || Sbjct 157432 TGCATTGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 157373 Query 128929 TGATCAATAAAGGGGCCGCGATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCC 128988 ||||| || || | || || ||||| ||||| || | ||||||| || ||| Sbjct 157372 TGATCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 157313 Query 128989 CACACCGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTG 129048 || ||||||||||| || || | ||| | || ||||||| ||| |||||||| | Sbjct 157312 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGTTCGATGTTCTGGATCGAA 157253 Query 129049 CCGTTGTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAA 129108 ||||||| || | ||| |||| ||| | |||| ||| | | || ||| | Sbjct 157252 CCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCAGA 157193 Query 129109 TCGTCGGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAA 129168 || | | ||| || | ||| | || ||||| || |||| || ||||||||| ||| Sbjct 157192 TCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAG 157133 Query 129169 ATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCG 129228 | |||| ||| ||||||| ||||| || |||||||| || ||||| ||||| | || Sbjct 157132 ACGTTGGACGTGTACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCC 157073 Query 129229 GTGGGCATGTAAGCCACGCA-AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttt 129287 || ||||| || | ||| || ||||| |||| |||||| | ||| | ||| | Sbjct 157072 GTCGGCATCGGCGCGA-GCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCT-TTTCCT 157015 Query 129288 tAATTGT-GTCCAGTCCCACATCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATA 129346 | | || | ||| | ||||| || ||| | ||||||| |||||| |||| | Sbjct 157014 TCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAA 156955 Query 129347 TACCCAAACTGGCGGGACTGGAAAAGTAGGAATCGT---GCACGCCGTAAGCTTTTGCCA 129403 ||||| || | ||| ||| | |||| | | | | ||| |||| Sbjct 156954 TACCCTTGCTCACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGC---GGCCA 156898 Query 129404 ATTCGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAAT-TTTGGTG-TTCAA 129461 ||||| || ||||||| || ||| | || || || || ||| | || || || | Sbjct 156897 TCTCGCAGCTAGCTTCCAGCGCACCATAGTAGATGGTCTC--AAATATCTGCTGATTGAG 156840 Query 129462 CACTTTGGCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAACC 129521 | || |||| | || |||||||| | | || || | || | || |||| ||| Sbjct 156839 CTTTTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACC 156780 Query 129522 TTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGA---TTTTTGTGCCGACAACAA 129578 || | || | |||||| || || || | || || || | ||| || | Sbjct 156779 CTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACC-- 156722 Query 129579 GGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTA 129638 || ||| |||| | ||| ||||| ||||| || || ||| ||||| | ||| | Sbjct 156721 -GGGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTC 156663 Query 129639 TTTTAACATTTCAAAATTGTACTCGCCTAC-ATCGATGTCGACAAATTGATTGACACAAA 129697 ||| | | | | |||| || | ||| ||| | ||| || || | || Sbjct 156662 TTTCAGCTTCGCGAAATCATA----CGTACGGTCGGGCTGGACGAACATGTTCAGCGCAA 156607 Query 129698 TCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGC 129757 ||||||||| ||||| || || ||||| || |||||| ||||| |||| || Sbjct 156606 TCGAGGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGC 156547 Query 129758 ACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCAT 129817 | | ||| || |||||||| | | | ||| || ||||| ||||| || | Sbjct 156546 AAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGT 156487 Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACA 129877 | ||||||| ||||||||| |||||| || || || | ||||| || | ||| Sbjct 156486 CCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA 156427 Query 129878 AGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATACAGTT 129937 || | ||||| | ||| | | || ||| || || || || |||| | Sbjct 156426 GATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCCTTTTCATAACCCGTGTACAACT 156367 Query 129938 GTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAA---CGGCGATTCACGCGGACACATCA 129994 || || ||| ||| || | ||| ||| || | || |||| ||||||| Sbjct 156366 TCTCGAACTCTTCGCC--CCAC-GAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCA 156310 Query 129995 AACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGT 130054 |||||||| || | | ||| || || || | ||| |||| ||| |||| ||| || |||| Sbjct 156309 AACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGT 156250 Query 130055 ACAACAAAT--CTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAA 130112 | |||| | || |||| | ||||| || |||| ||||| || | || Sbjct 156249 AAAACATGTCCCTTGCGCGCACC--TCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAA 156192 Query 130113 ATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCG---TTT 130169 || | | ||| |||||||||| || | || || || | || || ||| || Sbjct 156191 CTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATT 156132 Query 130170 GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCC 130229 ||| || || || |||| || | | ||||||||| || |||| ||| | |||| || Sbjct 156131 GCCGCCCTGATCGACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCC 156072 Query 130230 GTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCT 130289 ||| | | ||||| |||| ||| | | || ||||| | | || ||| | Sbjct 156071 GTTCGAAATTCCGTTCGTGCCAGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTT 156012 Query 130290 TAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAA 130348 || || ||||| ||| | | || || |||| ||||| | || | ||||| || || | Sbjct 156011 CAGCCCGATGCCACCGGCCGACTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAGA 155953 Query 130349 TGCCAACGATACTGTCTTC 130367 |||| |||| ||||| || Sbjct 155952 TGCCCTCGATGCTGTCGTC 155934 >seq712 Length=12093160 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| ||| | || ||||| || || || Sbjct 3459796 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACGATTACCCTTGAGGTCGAGCCC 3459737 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || |||||||||||||| || || ||| Sbjct 3459736 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGAT 3459677 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | |||||| |||||| | ||||| ||| Sbjct 3459676 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTAC 3459617 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || ||| | ||| | || |||| ||||||| ||| Sbjct 3459616 AACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGT 3459566 >seq934 Length=8401807 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 || |||||| ||||| || ||||| | ||||| || || |||| ||||| || || | Sbjct 268653 AAGGATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACGCTTGAGGTCGAGCC 268594 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || || | || || | || || || || ||||||||||| || || || || Sbjct 268593 CTCGGACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGA 268534 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||||| || ||||||||||| ||| | |||||| |||||| | || || || Sbjct 268533 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTA 268474 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || ||||| ||| | || || || | ||| | || || ||| Sbjct 268473 CAACATCCAGAAGGAATCGACCCTTCACTTGGTGCTCCGACTCCGTGGTGGT 268422 >seq490 Length=13136524 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| ||||| ||||||| |||||| |||| || || || | || | Sbjct 10201652 ATGCAGATTTTTGTAAAAACGCTAACCGGAAAAACGATCACGCTCGACGTCGCCGCCTCG 10201593 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || || ||||||||| ||||| | || ||||||||| |||| || ||| Sbjct 10201592 GAAACGGTTCTAGATATCAAAAGTAAAATCGAGGAACGCGAGGGTATTGCACCAGACCAA 10201533 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | || ||| ||| | |||||||||||||| Sbjct 10201532 CAGCGCATCATCTTCGCCGGCAAGCAGCTGGACGATGGCCGAATTATCTCCGATTACAAC 10201473 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTG 22437 || || | | ||| || || ||| | || |||| ||| Sbjct 10201472 ATCCAGCACGGATCGACGATGCATCTGGTGCTGCGGTTG 10201434 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || || || || || || ||||||| || || || | | Sbjct 5730910 GATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTC 5730969 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || | | || || || || ||||||||||| || || || ||||| Sbjct 5730970 GGACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCA 5731029 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| || || |||||||| ||| | ||||| || || | ||||| ||||| Sbjct 5731030 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAA 5731089 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || || || || ||| | || || || | || |||| |||||| Sbjct 5731090 CATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGGT 5731138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || ||||| || ||||| || || ||||||||| Sbjct 5732797 AAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAA 5732856 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || || | ||||| |||||||| || || || || ||| | || Sbjct 5732857 CAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCGACCTTGCAC 5732916 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 || || | || |||| ||||| Sbjct 5732917 TTGGTCCTCCGTCTGCGTGGAGG 5732939 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || ||||| || ||||| || || |||||||| Sbjct 5732341 AAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAG 5732400 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || || | ||||| |||||||| || || || || ||| | || Sbjct 5732401 CAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCGACCTTGCAC 5732460 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || || | || |||| |||||| Sbjct 5732461 TTGGTCCTCCGTCTGCGTGGAGGT 5732484 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || ||||| || ||||| || || |||||||| Sbjct 5732569 AAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAG 5732628 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || || | ||||| |||||||| || || || || ||| | || Sbjct 5732629 CAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCGACCTTGCAC 5732688 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || || | || |||| |||||| Sbjct 5732689 TTGGTCCTCCGTCTGCGTGGAGGT 5732712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721523859290