Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq701 91.5 4e-15 >seq701 Length=424527 Score = 91.5 bits (100), Expect = 4e-15 Identities = 195/287 (68%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257 |||||||||||| ||||| |||||||| ||| |||||| | ||||||| | ||| | Sbjct 401395 CTGCGAGCTGCTCAACTTCGTCAACGTGCTCGGACAGATCTACTTCATGGACTTCTTCCT 401336 Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGT--TACCTTCTTCAACCAG--GAAGCCG 3313 | || || || | |||||| | | | || | | || ||| | || | | ||| Sbjct 401335 GGACGGGGAGTTCACGACGTACGGCAGCGACGTAGTGCGTT--TCACCGAGATGGAACCG 401278 Query 3314 CCCATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTT 3373 || | || ||| || ||| ||| ||||| || | | || ||||| | Sbjct 401277 GAG----GAGCGTGGCGATCCT-ATGGCGCGCGTCTTCCCGAAGGTGACCAAGTGTACCT 401223 Query 3374 TTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGG 3433 | ||||| |||||||| || || | | | || | ||| || || ||| | || ||| Sbjct 401222 TCCACAAGTACGGTCCGTCCGGAAGCGTACAGAAATTCGACGGTCTGTGCGTGCTGCCGC 401163 Query 3434 AGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||| | |||||||||||||||||| | ||||| |||||||||||| Sbjct 401162 TGAACATCGTCAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTC 401116 Score = 84.2 bits (92), Expect = 5e-13 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733 |||||||||| || | ||||| | ||| | | ||||||||| |||||||| || Sbjct 401918 CCGTGAAGGGTCTACTTAAGCTAG-ACCAGGTGTGCATCGACAACAACATCTTCCGGCTG 401860 Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793 || ||| || || ||||||||||| |||||||| || |||||||| || ||||| ||| Sbjct 401859 CACTACAAGGCGACGGTGATCATCCTGATCGCGTTCTCGTTGCTGGTCACCTCGCGACAG 401800 Query 2794 TAC 2796 ||| Sbjct 401799 TAC 401797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479827191000