Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq490 98.7 8e-16 seq934 93.3 4e-14 >seq490 Length=13136524 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 ||| ||||| ||| | | || |||||||||||| ||| | || ||| || || || Sbjct 10201449 ATGCATCGTCGATCCGTGCTGGATGTTGTAATCGGAGATAATTCGGCCATCGTCCAGCTG 10201508 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 || || ||| |||||| ||||||||||| || | ||| || || || | || || Sbjct 10201509 CTTGCCGGCGAAGATGATGCGCTGTTGGTCTGGTGCAATACCCTCGCGTTCCTCGATTTT 10201568 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 ||| | | | ||| || || | || ||||||| | || | |||||| ||||| Sbjct 10201569 ACTTTTGATATCTAGAACCGTTTCCGAGGCGGCGACGTCGAGCGTGATCGTTTTTCCGGT 10201628 Query 114359 CAGAGTTTTTACAAAAATCTGCATGGC 114385 || ||||||||||||||||||||||| Sbjct 10201629 TAGCGTTTTTACAAAAATCTGCATGGC 10201655 >seq934 Length=8401807 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| |||| | || || || | || ||||| || || |||||||| || Sbjct 268421 TACCACCACGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCG 268480 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || ||| || ||| || || || || || || |||| |||||||| || ||||| | Sbjct 268481 ACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGG 268540 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || || || ||||| ||||| || | | ||| | ||||| | || |||| Sbjct 268541 GGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGA 268600 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | || | || |||||||| || ||||| || ||||||||||| Sbjct 268601 CCTCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420127917588792