Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq113 123 2e-23 seq490 96.9 3e-15 seq712 93.3 3e-14 >seq113 Length=5901441 Score = 123 bits (136), Expect = 2e-23 Identities = 204/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 37821 GCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAG 37880 ||||| |||||||| | ||||||||||||| || | ||| | ||||| |||| ||| Sbjct 1291619 GCCGAAACGCACGACGACCTGTGGAACGCGGCCCAGCTGCAGATGGTGCGGGAGGCCAAG 1291678 Query 37881 ATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCT 37940 ||||| | |||||||||| ||| ||||| || |||| ||| | | | || Sbjct 1291679 ATGCACGGCTTCCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGAC-GCGAACGCC 1291737 Query 37941 C-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGA 37999 | || |||||| | ||||| || || || ||| ||||| |||||||||| || Sbjct 1291738 CGAGGAGGCGCTCGAGACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGA 1291797 Query 38000 TCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGC 38058 || ||||| |||||||| || ||||||| || |||||| | ||||| | |||| Sbjct 1291798 CCCGAACGGGTACGTCGGTTGCATGTGGTCGAT-CGCGGGCATCCACGACCAGGGCTGGA 1291856 Query 38059 GCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| ||| | |||||| ||||| |||||||||||| |||| || Sbjct 1291857 AGGAGCGCGACATATTCGGCAAAATTCGCTACATGAACTACGACGGCTG 1291905 >seq490 Length=13136524 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 33898 AAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCT 33957 || || |||| ||| || ||||||||||| || ||| ||||||||| || ||||| ||| Sbjct 10198962 AATCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCT 10199021 Query 33958 GCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACC 34017 | || || | || |||| ||||| ||||| || ||||| |||||||||||| Sbjct 10199022 GACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGA 10199081 Query 34018 GGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTC 34076 || | || || || ||| ||| || ||| | | ||| | | | || | | || Sbjct 10199082 GGGATGCCTTCCTTATCCTGAATCTTAGCCTTCA-CGTTCTCGATAGTGTCCGATGGCTC 10199140 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTTAA 34133 ||| | ||| || || |||||||| || || || || ||||||||||| |||| Sbjct 10199141 CACTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATGATTAA 10199197 >seq712 Length=12093160 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| ||||||||||||||||| || ||||||||| |||||||| || | Sbjct 3459566 ACCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 3459625 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || | || |||| ||||||||||| || || || |||||||||||| ||| Sbjct 3459626 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 3459685 Query 34020 CACGCTCTCTTTGTCC 34035 | | ||| |||||| Sbjct 3459686 GATACCCTCCTTGTCC 3459701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397056273575332