Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq490 152 1e-31 seq934 122 2e-22 >seq490 Length=13136524 Score = 152 bits (168), Expect = 1e-31 Identities = 175/234 (75%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || ||||| | ||| || || |||||||| ||||| | Sbjct 10198964 TCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGA 10199023 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | || ||||| ||||||||||||||||| ||| || Sbjct 10199024 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 10199083 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT---TC 288422 ||| ||||| |||||||| || || || |||||||| || |||| || |||| || Sbjct 10199084 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTC---CGATGGCTC 10199140 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||||| |||||||| ||||| |||||||| ||||||||||| || ||||| || Sbjct 10199141 CACTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATGAT 10199194 Score = 134 bits (148), Expect = 3e-26 Identities = 147/194 (76%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || |||||||| || | ||||| || |||||| Sbjct 5732903 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAG 5732844 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || || |||||||| || || |||||| Sbjct 5732843 ATCAGACGCTGCTG---ATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACG 5732787 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || || ||||| ||||| || ||||| ||||| Sbjct 5732786 TTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTC 5732727 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 5732726 ACGAAGATCTGCAT 5732713 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || |||||||| || | || || || |||||| Sbjct 5732675 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 5732616 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || || |||||||| || || |||||| Sbjct 5732615 ATCAGACGCTGCTG---ATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACG 5732559 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || || ||||| ||||| || ||||| ||||| Sbjct 5732558 TTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTC 5732499 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 5732498 ACGAAGATCTGCAT 5732485 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || |||||||| || | || || || |||||| Sbjct 5731101 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 5731042 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || || |||||||| || || |||||| Sbjct 5731041 ATCAGACGCTGCTG---ATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACG 5730985 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || || ||||| ||||| || |||| ||||| Sbjct 5730984 TTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAACGTCTTC 5730925 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 5730924 ACGAAGATCTGCAT 5730911 Score = 125 bits (138), Expect = 2e-23 Identities = 143/191 (75%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || |||||||| || | || || || |||||| Sbjct 5732447 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 5732388 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| |||||||| || || |||||||| || || |||||| Sbjct 5732387 ATCAGACGCTGCTG---ATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACG 5732331 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || || ||||| ||||| || ||||| ||||| Sbjct 5732330 TTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTC 5732271 Query 288460 ACGAATATCTG 288470 ||||| ||||| Sbjct 5732270 ACGAAGATCTG 5732260 >seq934 Length=8401807 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||||| || || | |||| || ||| || ||||| || ||||| | Sbjct 268423 CCACCACGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGAC 268482 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||||||||| ||| ||| Sbjct 268483 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGG 268542 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || || ||||| ||||| || | || | || || Sbjct 268543 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACC 268602 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| || || || ||||| |||||||| Sbjct 268603 TCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179635265268348