Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq302 109 7e-19 seq368 102 1e-16 >seq302 Length=5740867 Score = 109 bits (120), Expect = 7e-19 Identities = 178/251 (71%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 8685 GGTATTCTCTTCAACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744 || || || ||||||||||| |||||||| || || | |||| ||||| |||||| Sbjct 882917 GGGATCCTGTTCAACCACGAATCACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATC 882858 Query 8745 A-CCGAT-GGTATCAAACAAATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACC 8802 | ||| | ||| | || | ||| | | ||| || ||||| | | || |||| || | Sbjct 882857 ACCCGCTCGGTGGCGAAGATTTCG-CTC-GGTCAGCAGGAGTGCGTCGAGCTGGGTAATC 882800 Query 8803 TCAACGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTAC 8862 || | | || | |||||||| |||||||| ||||| ||||| || |||||| | | Sbjct 882799 TCGATTCGAAGCGCGACTGGGGCCACGCCAAAGACTACGTTGAGGCGATGTGGTTGATGA 882740 Query 8863 TTCAACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGG 8922 | || || || || |||| || | |||| |||||||||| || || ||||| || | | Sbjct 882739 TGCAGCAGGAGCAGCCGGAAGATTTTGTCATCGCGACGGGCGAAACGCACTCGGTGCGTG 882680 Query 8923 AGTTCGTTGAG 8933 |||| || ||| Sbjct 882679 AGTTTGTCGAG 882669 Score = 98.7 bits (108), Expect = 1e-15 Identities = 336/519 (65%), Gaps = 6/519 (1%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || ||||||||||| ||||| | || |||||||| ||| || Sbjct 73040 GGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAGAACGTCAGACC 73099 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || |||||||||| |||||| || || || || ||||||||| Sbjct 73100 CGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGAAGAT 73159 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || |||||||| | | ||||| ||||| | | ||| | | Sbjct 73160 GCCCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGCTTGCTCGAGAT 73219 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| |||| |||||| | ||||| |||| | ||||||| || | |||||| | || Sbjct 73220 CCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCGATCGCGTTGAA 73279 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | || | || || || |||||| | || || || || || | || Sbjct 73280 CAGGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGCGAGTACATCTC 73339 Query 126346 GCCGTGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 126403 || ||| || ||| || ||| |||| || ||||||| |||| || || | | | Sbjct 73340 GCTGTGCAC--GTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCCTCCGTCACC 73397 Query 126404 TGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462 || ||||| | ||| || | | | |||||| || || || || || | || Sbjct 73398 TGCACCTCCT-GGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTCCGAGGCGGC 73456 Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTC 126522 ||| || ||||| | | | ||||| | | || || ||||| | | |||||| Sbjct 73457 AAAGAAGGCCAGCACGTGCGAGATGAAGTGACGCTCGCTCGGCTTCAGCGAATCCCAGTC 73516 Query 126523 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | | ||||||||||| || ||||| ||| | ||||| Sbjct 73517 CTTCATGTCCTTCGAGAGGTCCACCTCTTCCACGGTCCA 73555 >seq368 Length=3665626 Score = 102 bits (112), Expect = 1e-16 Identities = 187/270 (69%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGAGACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTG 171939 |||||||||||||||| || ||| ||| |||||||| | | ||||| || || || Sbjct 2226853 GTGAAGATGTACCTCGGACTAG-CGCTATCCTTGCCACCGGTCAACCGCGTACCGAACTG 2226911 Query 171940 ACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGAC 171999 ||| | ||| || |||||||| ||||| ||| | ||||| | |||| ||||| Sbjct 2226912 ACCGCCCGGAAACAGTAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTGAC 2226971 Query 172000 AATCGTATCCGCG---AGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATA 172056 ||||| || | || || ||| ||||| ||||| || ||| | ||||| || | Sbjct 2226972 GATCGT---CGAGCAAAGCGATTGTTCGCCGTGGTGGTACGCGGACATTTCCGCCACCGA 2227028 Query 172057 CGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACAT 172116 |||||| ||| |||||||||| ||| |||| || | |||||||| ||| Sbjct 2227029 ACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCACGTGAACAG 2227088 Query 172117 GACCTTTCTCTGTGAAGGCTTGAGGCCGTC 172146 ||||| | ||| ||||| |||||||| Sbjct 2227089 CACCTTCCGCTGGCCCGGCTTCAGGCCGTC 2227118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597344146879280