Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq391 273 2e-68 >seq391 Length=2819257 Score = 273 bits (302), Expect = 2e-68 Identities = 1069/1661 (64%), Gaps = 45/1661 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | || || | ||||||||| |||||| ||||| | | ||||| | |||| | Sbjct 155688 TACAACTATTTCGGCTTCAAAACCCTGGAGCGTTCGTATTTGTTGAAGATCAAGGGCAAG 155747 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| | ||||| || |||||||||||||||||||||| || |||||| ||| Sbjct 155748 ATTGTCGAGAGGCCGCAGCATATGCTGATGCGCGTCGCCATCGGCATCCACGGCACGGAC 155807 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | | | | | | || | ||| || | || |||| || Sbjct 155808 ATCGAGGCAGCGATCGAGACGTACA---ATCTGCTCTCGGAGCGTTACTTTACCCATGCT 155864 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | |||||| ||||| |||| || | | || ||| |||| || || || ||| || Sbjct 155865 TCGCCGACCATGTTCGCGGCGGCCACGCAGCGTCCCCAGCTGTCGTCTTGCTTTCTGCTG 155924 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | | |||| |||| || || | ||||| || ||| | || || ||| Sbjct 155925 ACCATGTCCGACGACAGCATCGAGGGCATCTACGACACGCTGAAGCAGTGCGCACTGATC 155984 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || | || || || |||||| | | || ||| | | || || | ||| | ||| Sbjct 155985 TCCAAGTCGGCCGGTGGCATCGGGCTGAACGTGCACTGCATCCGGGCGAAGGGAACGTAC 156044 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| || || || || | || ||||| | || || ||||| || || | |||||| Sbjct 156045 ATCTCTGGCACGAACGGAATTTCGAACGGGTTGGTACCGATGCTGCGCGTGTACAACAAT 156104 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 |||| || ||||| || ||||| || | | || ||| | || || |||| || Sbjct 156105 ACGGCACGGTACGTCGATCAGGGCGGCAATAAGCGGCCAGGTGCGTTTGCCATCTACCTG 156164 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| ||||||| || ||| | || | || ||| || ||| |||||| || Sbjct 156165 GAGCCGTGGCACGGCGATGTGTTTGAGTTTTTAGATCTGAAGAAAAACACCGGCAAGGAG 156224 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | | || || ||| | || ||||| |||||| | || || || || ||| | ||| Sbjct 156225 GAGGTGCGCGCAAGGGACATGTTTTACGCGCTCTGGATACCGGATCTGTTCATGCAGCGC 156284 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || ||| ||| | |||||| | | || || | || ||||||||| || |||| Sbjct 156285 GTGGAGGCGAACGAAACGTGGAGTTTGATGTGCCCGCACGACTGTCCCGGATTGGCCGA- 156343 Query 94375 GTTTGTGGATCGCGT--TTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 || |||| || || || | ||||| | |||| ||| | ||||| || Sbjct 156344 -TTCGTGGGGCGAAGAGTTCGAGAAGTTGTACACGGGTTATGAAAAGGAGGGCCGCTTCA 156402 Query 94433 ---GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | |||| | || || |||| |||||| | |||| | || |||||||||| Sbjct 156403 TCCGCCAGGTAAAGGC-GC-AGGAT-CTGTGGTTTGCGATCATCGAATCCCAGGTGGAGA 156459 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 |||| || ||||| ||| ||||||| | ||| ||| |||||| || || Sbjct 156460 CGGGCGTACCGTACATGCTGTACAAGGACGCGTGCAATCGCAAAAGCAACCAACAAAACA 156519 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| |||||| |||| || || |||||||||||||| ||||| | || ||||| Sbjct 156520 TCGGCACCATCAAGTGCTCTAACCTTTGCACCGAGATTGTGGAGTACTCGTCGAAGGACG 156579 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC- 94668 | | || ||||| ||||||| ||| || ||| || ||||| | | || || Sbjct 156580 AAGTGGCGGTGTGCAACCTGGCCTCGATTGCGCTGAACATGTTCGTCC---AGCCCGACC 156636 Query 94669 --ACGTCTACTGCTTCGTTCGAT-CTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTC 94725 |||| | | |||| ||| ||| | ||| | | || ||| | | | | Sbjct 156637 GTACGTATGAT--TTCG--CGAAGCTGAAAGAGGTAGCCAAAATCGTG------ACGCGC 156686 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 ||| |||||| | | |||||| |||||||||||| || ||||| ||| || ||| Sbjct 156687 ---AACTTGAACAAGATTATCGACGTGAACTTCTACCCGGTGCCGGAAGCGAAGCGCTCG 156743 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || || || || ||||| ||||||||||||||| | || || ||| | | || Sbjct 156744 AACATGCGCCACCGTCCGATCGGTATCGGCGTCCAGGGTATGGCTGATGCGTTCATCTTG 156803 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 ||| | | || ||||| || || ||| | ||| | | ||||| || | | Sbjct 156804 ATGGGCTTCCCGTACGAGAGTGCGGAGGCGCAAAAGCTCAATCAGCAGATATTTGAGACC 156863 Query 94906 ATTTATTACGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACA 94964 || || || || || || || | | | | | | ||||| | || | || | || | Sbjct 156864 ATCTACTATGGTGCGCTGGAAGCTAGCTG-CGAGATGGCC-GCTCAGGAGG--GACCGTA 156919 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| ||| | ||||| || || |||| ||| | |||| |||| | ||| Sbjct 156920 CGAGACGTACGAAGGATCTCCGGTGAGCAAGGGTATTCTGCAGTACGACATGTGGAACAA 156979 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACACGGT 95082 | || ||| |||| | |||| | ||| | | ||| | |||||||||| Sbjct 156980 GGTACCGACGGACCTGTGGAATTGGGCGACGCTGAAGGAAAAGAT--TGCCAAACACGGT 157037 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 ||| ||| | ||||| | || || ||||| ||||| || ||||| || || | ||| Sbjct 157038 GTGCGCAACTCACTGCTGCTCGCGCCGATGCCGACGGCTTCGACGGCACAAATTTTGGGC 157097 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 ||||||||||||||||| || | ||| |||||||| |||||| |||| || || | || Sbjct 157098 AACAACGAGTCGTTCGAGCCGTACACGTCCAACGTCTACAACCGGCGCGTTCTGTCGGGC 157157 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGT 95262 || || | || | ||| | ||||| | ||| ||||| | | ||| |||||| Sbjct 157158 GAGTTTCAGGTGGTGAACCACCACCTGATCAAGGATCTGACCACGCACGGTCTGTGGGAC 157217 Query 95263 GACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATA 95322 || | | |||||| | | || | |||||| || ||||||||||| |||||| Sbjct 157218 GATGATATGAAGAACACAATCCTGGCCCACAACGGTTCGATCCAGAACATCGAACAAATA 157277 Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 ||| |||| | | || ||||| || || |||||||| Sbjct 157278 CCGAAGGAAGTGCGCGATCTGTACAAAACGGTTTGGGAGAT 157318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494715371005360