Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq379 129 4e-25 seq490 82.4 6e-11 >seq379 Length=19898295 Score = 129 bits (142), Expect = 4e-25 Identities = 334/503 (66%), Gaps = 6/503 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 || || ||||||||||||| ||| | ||| ||| ||||||| ||| || |||||||| Sbjct 14151980 GCAGGATTCGGTGTGACGGGCGGAGCCCACCGGCTGTGGACGCACCGGGCGTACAAGGCG 14151921 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || || | ||||| | |||| || || | || ||||||| | | Sbjct 14151920 AAGCTGCCGCTCCGGATCATCCTGATGTGCTGCTACTGTATGTCCGGCCAGAACAGCCTG 14151861 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| ||||||| | | |||||||||||||| || ||| || ||||| Sbjct 14151860 TTCGATTGGGTGCGCGATCACCGCATCCACCACAAGTACTCGGAGACGGACGCGGACCCG 14151801 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||| | ||| | ||||||| | | ||||||| || ||||| |||| |||| || Sbjct 14151800 CACAACTCGAACCGCGGGTTCTTCTACGCGCACGTCGGCTGGCTGCTGATCCGCAAGCAC 14151741 Query 108580 CCCGACGTG-ATCTCGGCCGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGT 108638 || || ||| ||| | || || || |||||| ||||| | | |||| ||||| Sbjct 14151740 CCGGA-GTGCATCAAGAAGGGCCGGCTGATCGACATGTCGGACGTGTCGGCCGACCCGGT 14151682 Query 108639 GGTAGTGTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGTTATACC 108698 | || ||| ||||||||| || || || || || || | | || Sbjct 14151681 TATCAAGTTCCACGAGCGGTACTTTATGGGGCTGAAGATCCTGTTCACGTTCATCGTGCC 14151622 Query 108699 GGTGTGGGTGCCGGTCGCGTGTT--GGGGGGAGACGTTCGCGGCGGCGTTCCTGTCTCAG 108756 | || || || || || |||| ||| ||| || || | | |||||| | | Sbjct 14151621 GTCGTTCGTACC-GTGGC-TGTTCCTGGGCGAGCCGCTCTACCTGTCCTTCCTGGCGAAC 14151564 Query 108757 GCCGTTCTGAGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCAC 108816 | | ||| |||||| || || || ||||| ||||||||||| || ||||| ||| Sbjct 14151563 TGCCTGCTGCGGTACGTGCTGACGCTGAACTTCACGTGGCTGGTGAACAGTGCGGCCCAC 14151504 Query 108817 ATGTACGGCGACCGTCCGTTCGA 108839 || |||||| || |||| ||| Sbjct 14151503 ATCTACGGCAACAAGCCGTACGA 14151481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | |||||||||||||||||||||||||| |||||||| | ||||||||||| | Sbjct 14155023 TGGCCATGGGCGAGGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 14154964 Query 108941 CCGAGTTGGGGAACGACT 108958 |||||||||| ||| ||| Sbjct 14154963 CCGAGTTGGGCAACTACT 14154946 Score = 95.1 bits (104), Expect = 9e-15 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||| | || || || ||| | ||| ||| | |||||||| Sbjct 14158633 GCCGGGTTCGGCGTGACCGGTGGGGTGCACCGGCTCTGGTGCCATCGGTCGTACAAGGCG 14158574 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || | | |||| | |||| |||| | || || |||||||| ||| Sbjct 14158573 AAGCTGCCGCTCCGCATCATCCTCATGTGCTGCTACTCGATTGCCGGCCAGAACACGATC 14158514 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518 | ||||| | || ||| | | |||||||||||||| || ||| |||| || || Sbjct 14158513 TACGACTGGGTCCGGGACCACCGCATCCACCACAAGTACTCGGAAACGGACGGT-GATCC 14158455 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| | Sbjct 14158454 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAGCA 14158395 Query 108579 CCCCGA 108584 ||| || Sbjct 14158394 CCCGGA 14158389 Score = 86.0 bits (94), Expect = 5e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 ||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||| || Sbjct 14151240 GGCGAAGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGGCCGAGATG 14151181 Query 108949 GGGAACGACT 108958 || || ||| Sbjct 14151180 GGCCACTACT 14151171 >seq490 Length=13136524 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || | ||||| |||||||||||||| || ||||||||||| | || Sbjct 7565067 GGTGGCTTCGTTCGCGTTTGGCGAAGGATGGCACAACTATCATCACGTGTTCCCGTGGGA 7565008 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 7565007 CTACAAGACGGCCGAGCTGGGCAACTAC 7564980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381766909484304