Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq391 271 7e-68 seq490 89.7 5e-13 >seq391 Length=2819257 Score = 271 bits (300), Expect = 7e-68 Identities = 928/1430 (65%), Gaps = 30/1430 (2%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGG-ACGCGACATCGAAAACGCGAC 122974 || |||||||| ||||||||||| || ||| | ||||| ||| |||||||| |||| Sbjct 155763 CAGCATATGCTGATGCGCGTCGCCATCGGCATCCACGGCACG-GACATCGAGGCAGCGAT 155821 Query 122975 CGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGC 123034 ||| || ||| || || | || | | || || || || || || ||||||| Sbjct 155822 CGAGACGTACAATCTGCTCTCGGAGCGTTACTTTACCCATGCTTCGCCGACCATGTTCGC 155881 Query 123035 CGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAG 123094 || | |||| || || ||| |||| || || ||| |||| ||| || ||| ||||| Sbjct 155882 GGCGGCCACGCAGCGTCCCCAGCTGTCGTCTTGCTTTCTGCTGACCATGTCCGACGACAG 155941 Query 123095 CATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154 |||| || ||||| || || || | ||||| |||| ||||| | | ||| || Sbjct 155942 CATCGAGGGCATCTACGACACGCTGAAGCAGTGCGCACTGATCTCCAAGTCGGCCGGTGG 156001 Query 123155 CATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGG 123214 ||| || ||||||||||| | | | | |||| |||| |||| |||| Sbjct 156002 CATCGGGCTGAACGTGCACTGCATCCGGGCGAAGGGAACGTACATCTCTGGCACGAACGG 156061 Query 123215 AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 ||| | |||| | | | | |||||||| || ||||| || | | ||| ||||||| Sbjct 156062 AATTTCGAACGGGTTGGTACCGATGCTGCGCGTGTACAACAATACGGCACGGTACGTCGA 156121 Query 123275 CCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 ||||||||| || || ||| ||| | || ||||| || || |||||||||| || Sbjct 156122 TCAGGGCGGCAATAAGCGGCCAGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGA 156181 Query 123332 TGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGA 123391 ||||| || |||||| || | || |||| || ||| || | || | || Sbjct 156182 TGTGTTTGAGTTTTTAGATCTGAAGAAAAACACCGGCAAGGAGGAGGTGCGCGCAAGGGA 156241 Query 123392 TTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGT 123451 |||| ||||| | ||| |||| ||| |||| |||| ||||| | | ||| Sbjct 156242 CATGTTTTACGCGCTCTGGATACCGGATCTGTTCATGCAGCGCGTGGAGGCGAACGAAAC 156301 Query 123452 GTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGT 123510 |||| | ||||| |||| || |||||||| ||| ||| | ||| | ||| Sbjct 156302 GTGGAGTTTGATGTG-CCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGT 156360 Query 123511 TTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCCGGCAC 123570 | || |||||||| || || || || ||| | | ||||| ||| | Sbjct 156361 TCGAGAAGTTGTACACGGGTTATGAAAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCGC 156420 Query 123571 GTGATTTGTTCAAATTT---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGC 123627 ||| ||| ||| || |||||| | || || || || || |||||||||| Sbjct 156421 AGGATCTGT---GGTTTGCGATCATCGAATCCCAGGTGGAGACGGGCGTACCGTACATGC 156477 Query 123628 TCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTA 123687 | ||||| ||||| ||||| | |||| ||| || ||| | || || || || || Sbjct 156478 TGTACAAGGACGCGTGCAATCGCAAAAGCAACCAACAAAACATCGGCACCATCAAGTGCT 156537 Query 123688 GTAATCTTTGCTCCGAAATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGTAA 123745 ||| |||||| |||| ||| | || || | ||| | || ||||||| ||||| || Sbjct 156538 CTAACCTTTGCACCGAGATTGTGGAGTACTCGTCGAAG--GACGAAGTGGCGGTGTGCAA 156595 Query 123746 TTTGGCTTCGATTTGCG-TGAATCGTTGCGTCGA---AAACGGCGCTTTTAATTTCCAAA 123801 |||| |||| ||||| |||| | |||| | || | | | | ||||| | Sbjct 156596 CCTGGCCTCGA-TTGCGCTGAACATGTTCGTCCAGCCCGACCGTACGTATGATTTCGCGA 156654 Query 123802 CGCTCAAACGCATAACAAAAACTGTAGTAAAG---AATTTGAACAAAATTATCGATGTTA 123858 ||| ||| || | |||| | || | | || |||||||| |||||||| || | Sbjct 156655 AGCTGAAAGAGGTAGCCAAAA---TCGTGACGCGCAACTTGAACAAGATTATCGACGTGA 156711 Query 123859 ATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGG 123918 | || || || || ||||||| || || || ||| | ||| |||| | | Sbjct 156712 ACTTCTACCCGGTGCCGGAAGCGAAGCGCTCGAACATGCGCCACCGTCCGATCGGTATCG 156771 Query 123919 GCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAG 123978 || | || || |||| || ||||| | || || || | |||||||| || | || | Sbjct 156772 GCGTCCAGGGTATGGCTGATGCGTTCATCTTGATGGGCTTCCCGTACGAGAGTGCGGAGG 156831 Query 123979 CAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCT 124038 | | ||| ||| ||| ||| || || || || || || || |||| || |||| Sbjct 156832 CGCAAAAGCTCAATCAGCAGATATTTGAGACCATCTACTATGGTGCGCTGGAAGCTAGCT 156891 Query 124039 GCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAG 124098 |||| | || | || ||||||| | |||| || |||| |||| | Sbjct 156892 GCGAGATGGCCGCTCAGGAGGGACCGTACGAGACGTACGAAGGATCTCCGGTGAGCAAGG 156951 Query 124099 GTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCG-TT 124157 ||||| ||||||||||||||||||| |||||| | ||||| | ||| ||| Sbjct 156952 GTATTCTGCAGTACGACATGTGGAACAAGGTACCGACGGACCTGTGGAATTGG-GCGACG 157010 Query 124158 TTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCG 124217 | || || || | | |||||| |||| ||||| ||| || | ||| |||||| Sbjct 157011 CTGAAGGAAAAGATTGCCAAACACGGTGTGCGCAACTCACTGCTGCTCGCGCCGATGCCG 157070 Query 124218 ACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAAT 124277 ||||| | || || |||||||| || |||||||| || |||||||||| ||| ||| Sbjct 157071 ACGGCTTCGACGGCACAAATTTTGGGCAACAACGAGTCGTTCGAGCCGTACACGTCCAAC 157130 Query 124278 TTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCA 124327 | ||| || || || | | ||||| ||||| ||| | || || || Sbjct 157131 GTCTACAACCGGCGCGTTCTGTCGGGCGAGTTTCAGGTGGTGAACCACCA 157180 >seq490 Length=13136524 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 || || ||| ||||||| ||| ||| | | ||||| || |||||| || || Sbjct 10201437 CCGCAGCACCAGATGCATCGTCGATCCGTGCTGGATGTTGTAATCGGAGATAATTCGGCC 10201496 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 |||||||| || || || ||| | || | || || ||||| || | ||| || || Sbjct 10201497 ATCGTCCAGCTGCTTGCCGGCGAAGATGATGCGCTGTTGGTCTGGTGCAATACCCTCGCG 10201556 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || | ||||| |||||| || || || || || | |||| ||||| || | Sbjct 10201557 TTCCTCGATTTTACTTTTGATATCTAGAACCGTTTCCGAGGCGGCGACGTCGAGCGTGAT 10201616 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 |||||| |||||||| |||||||||||||| ||||| || Sbjct 10201617 CGTTTTTCCGGTTAGCGTTTTTACAAAAATCTGCATGGC 10201655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451996047049360