Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq391 244 2e-59 seq302 235 9e-57 >seq391 Length=2819257 Score = 244 bits (270), Expect = 2e-59 Identities = 357/502 (71%), Gaps = 2/502 (0%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||| ||||| ||||||||||| || || || ||||| ||| || | | || |||||| Sbjct 157529 CTTCGTTTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTA 157470 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 |||||| ||||| |||||| ||| |||| ||| | |||||| || | ||| |||| Sbjct 157469 CATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATTGACGTCAGCTTGCCGTA 157410 Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 ||| || || |||| ||| ||||| | ||||| || |||||||| | |||| || Sbjct 157409 GTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTC 157350 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072 || ||||| | ||| || ||| |||||||||||| ||||| ||| ||| || | Sbjct 157349 GGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCG 157290 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | | || | | || | | || || |||||| ||||||| ||||| | | | Sbjct 157289 CACTTCCTTCGGTATTTGTT-CGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGT 157231 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || | || || |||||| || | || |||| ||| | ||||||| |||| | Sbjct 157230 TCTTCATATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCA 157171 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 | |||||| || || ||||| || | ||| || | | |||| ||| | || |||| Sbjct 157170 CCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCTCGA 157111 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 ||| |||||||||||| ||||| || || || ||||| ||||| || || || |||| Sbjct 157110 ACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCA 157051 Query 204312 GGGAGTTGCGCACACCGTATTT 204333 | |||||||||||||||| ||| Sbjct 157050 GTGAGTTGCGCACACCGTGTTT 157029 >seq302 Length=5740867 Score = 235 bits (260), Expect = 9e-57 Identities = 440/639 (69%), Gaps = 13/639 (2%) Strand=Plus/Plus Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803 |||||||| || ||||| || |||||||| || | ||||| | || ||||| || || | Sbjct 72863 CAGCAACCGATCGGCCACGAACTCGATGTA-CTGCGACATCAGATCGCAGTTCATACCGA 72921 Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863 ||| ||| |||||||| | || ||| ||||||| ||| || ||||||| ||| | Sbjct 72922 GCATATCAACCGGGAGCGCCTTCGTCAGGAACTCCTGCTCGATTGCGACCGCATCGCGGA 72981 Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTT--GCCCAAAAT-GTGGTCCTTAAACAGGA 159920 || | || || || || | | |||||| || | | || | || |||| | Sbjct 72982 TGATTTCCGTCACGCGCTCCTTCGTCGGCTTCTGCACCAGATAGCGG------AACATCA 73035 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 |||| ||||| || ||||||||||||||||| || ||||| |||||||| || | | | Sbjct 73036 GGCAGGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAGAACGTCA 73095 Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 | |||||||| | |||||| || ||||| || |||||||| || || || || | Sbjct 73096 GACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGA 73155 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 |||| ||||| ||||| || |||||||| | | ||| ||||| ||| | || Sbjct 73156 AGATGCCCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGCTTGCTCG 73215 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCG 160159 | |||| | ||||| || |||||||| | |||||| | ||| |||| ||| Sbjct 73216 AGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGA-GCGTTTCGATCGCG 73274 Query 160160 TTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTAC 160219 || |||| ||| |||||||| || || || | |||||| ||||||| Sbjct 73275 TTGAACAGGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGCGAGTAC 73334 Query 160220 ATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGA 160279 || || |||||| || || || || |||||||| |||||| | |||||| Sbjct 73335 ATCTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCCTCCGTC 73394 Query 160280 TACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCC 160339 |||||||||||| |||| | | ||||||| | || || | ||||| | ||| Sbjct 73395 ACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTCCGAGGCG 73454 Query 160340 GCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCG 160378 |||||||| |||| |||||| |||||||| || | |||| Sbjct 73455 GCAAAGAAGGCCAGCACGTGCGAGATGAAGTGACGCTCG 73493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795142616668960