Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq490 161 2e-34 seq934 145 2e-29 seq712 136 9e-27 >seq490 Length=13136524 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || |||||||| |||||||| |||| |||||||| | || || | |||||| Sbjct 10198980 AGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCT 10199039 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||||||||| ||||||||||| |||||| || ||||| ||| Sbjct 10199040 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCC 10199099 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | || || || |||| |||||| ||| Sbjct 10199100 TGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCACTTCCAGCGTGATGGTC 10199159 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| Sbjct 10199160 TTTCCGGTCAGGGTCTTGACGAAGATTTG 10199188 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||| || Sbjct 5732468 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5732409 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| ||||||||||| || || ||||| || ||| Sbjct 5732408 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5732349 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | ||||| | | || || |||| ||||| ||| Sbjct 5732348 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5732289 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 5732288 TTGCCAGTCAGCGTCTTCACGAAGATCTG 5732260 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||| || Sbjct 5732696 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5732637 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| ||||||||||| || || ||||| || ||| Sbjct 5732636 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5732577 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | ||||| | | || || |||| ||||| ||| Sbjct 5732576 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5732517 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 5732516 TTGCCAGTCAGCGTCTTCACGAAGATCTG 5732488 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||| || Sbjct 5731122 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5731063 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| ||||||||||| || || ||||| || ||| Sbjct 5731062 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5731003 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | ||||| | | || || |||| ||||| ||| Sbjct 5731002 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5730943 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || ||||| || || || Sbjct 5730942 TTGCCAGTCAACGTCTTCACGAAGATCTG 5730914 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||||||||||| |||| ||||||||| | || ||| | ||| || Sbjct 5732924 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5732865 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || ||||||||||| ||||||||||| || || ||||| || ||| Sbjct 5732864 TCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5732805 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | ||||| | | || || |||| ||||| ||| Sbjct 5732804 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5732745 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 5732744 TTGCCAGTCAGCGTCTTCACGAAGATCTG 5732716 >seq934 Length=8401807 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || | ||| || ||||| ||||| |||| ||||||||| | || ||| Sbjct 268429 CGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGAGTG 268488 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct 268489 CGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCC 268548 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| ||||| ||||| | | || || || | | Sbjct 268549 TCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGC 268608 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| |||||||| ||||| || Sbjct 268609 GTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTG 268646 >seq712 Length=12093160 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || || ||||||||||| |||| ||||||||| | || || Sbjct 3459573 CGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 3459632 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| ||||||||||||||||||||||| ||||| || || Sbjct 3459633 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCC 3459692 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| || || | | || || || | Sbjct 3459693 TCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 3459752 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||||||||||||||| ||||| || || || || Sbjct 3459753 GTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTG 3459790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178902477154822