Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq490 149 7e-31
seq712 125 8e-24
seq934 111 2e-19
>seq490
Length=13136524
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||| | |||| ||||| || |||||| ||||| |||||||||||
Sbjct 5732711 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 5732652
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| || ||||||||||||||||| |||| |||||||| || | |||
Sbjct 5732651 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 5732592
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||||||| |||||| ||| | || | | |||||| || || ||
Sbjct 5732591 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACC 5732532
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||| |||||||| || || ||||| |||||
Sbjct 5732531 TCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485
Score = 145 bits (160), Expect = 9e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423
|| ||||| | | ||| | |||| ||||| || |||||| ||||| |||||||||
Sbjct 5732942 TTTCCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 5732883
Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483
|| ||||| || |||| || ||||| ||||||||||| |||| |||||||| || | |
Sbjct 5732882 GACAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGC 5732823
Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543
|| | | |||||||||| |||||| ||| | || | | |||||| || ||
Sbjct 5732822 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCG 5732763
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| |||||||| ||||| |||||||| || || ||||| |||||
Sbjct 5732762 ACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||| | |||| ||||| || |||||| ||||| |||||||||||
Sbjct 5731137 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 5731078
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| || ||||||||||||||||| |||| |||||||| || | |||
Sbjct 5731077 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 5731018
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||||||| |||||| ||| | || | | |||||| || || ||
Sbjct 5731017 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACC 5730958
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| |||||||| ||||| |||| ||| || || ||||| |||||
Sbjct 5730957 TCCAGAGTGATGGTCTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 5730911
Score = 143 bits (158), Expect = 3e-29
Identities = 166/224 (74%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||| | |||| ||||| || |||||| ||||| |||||||||||
Sbjct 5732483 CCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 5732424
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| || ||||||||||||||||| |||| |||||||| || | |||
Sbjct 5732423 AGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGG 5732364
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||||||| |||||| ||| | || | | |||||| || || ||
Sbjct 5732363 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACC 5732304
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTG 46590
|||| |||||||| ||||| |||||||| || || ||||| ||
Sbjct 5732303 TCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTG 5732260
Score = 123 bits (136), Expect = 3e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| | ||| | ||||||||| | || |||||| |||||||||||||| ||
Sbjct 10198965 CCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGAC 10199024
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || |||||||| |||||||| |||| |||||||| || | ||
Sbjct 10199025 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 10199084
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543
| || ||||| ||| ||||| ||| | || | | ||||| |||| |||
Sbjct 10199085 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTC---CGATGGCTCC 10199141
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| ||||||||| || || ||||| || || || |||||||||||
Sbjct 10199142 ACTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191
>seq712
Length=12093160
Score = 125 bits (138), Expect = 8e-24
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||||||||| | || |||||| ||||| ||||||||||| || ||||| |
Sbjct 3459579 CGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCA 3459638
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||||||||| || | |||||||| || | ||| | | |||||||
Sbjct 3459639 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTG 3459698
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||||| ||| | || | | ||| || | || || || | || ||
Sbjct 3459699 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATC 3459758
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600
|| || ||||| || ||||| || ||||| ||||| ||| ||
Sbjct 3459759 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAAC 3459800
>seq934
Length=8401807
Score = 111 bits (122), Expect = 2e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||| || |||||||| | || || |||||||||||||| ||
Sbjct 268459 TCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 268518
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| |||||||| || | || | | |||||||||| |||||| ||| | |
Sbjct 268519 ATCAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTT 268578
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||| | || || || | ||||||||| ||||| || || ||||| ||
Sbjct 268579 TCGATCGTGTCCGAGGGCTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACG 268638
Query 46583 AAGATTTGCAT 46593
|| || |||||
Sbjct 268639 AAAATCTGCAT 268649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565229455102320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |