Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq302 439 2e-118 seq490 138 1e-27 seq934 136 4e-27 seq712 131 2e-25 >seq302 Length=5740867 Score = 439 bits (486), Expect = 2e-118 Identities = 526/710 (74%), Gaps = 6/710 (1%) Strand=Plus/Plus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 |||| || |||||||||||||||||||| |||||||| ||||| || | || ||| Sbjct 72864 AGCAACCGATCGGCCACGAACTCGATGTACTGCGACATCAGATCGCAGTTCATACCGAGC 72923 Query 132781 AGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840 | | ||||| ||||| | || || || |||||||| |||||||| ||| || | Sbjct 72924 ATATCAACCGGGAGCGCCTTCGTCAGGAACTCCTGCTCGATTGCGACCGCATCGCGGATG 72983 Query 132841 ATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900 |||||| | |||||| || ||||| ||||||| || |||||||| ||| ||| Sbjct 72984 ATTTCCGTCACGCGCTCCTTCGTCGGCTTCTGCACCAGATAGCGGAACATCAGGCAGGCA 73043 Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960 || || || |||| |||||||| | || || | ||||| ||| |||| || ||| Sbjct 73044 AAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAGAACGTCAGACCCGGC 73103 Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020 || ||||| || || || ||||| || ||||| ||||| || || ||||||| |||| Sbjct 73104 ATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGAAGATGCCC 73163 Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080 |||||||| ||||| ||||||| |||||||| || |||| | ||||| | ||||||| Sbjct 73164 TCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGCTTGCTCGAGATCCAG 73223 Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140 ||||||||| |||||||| | || |||||||| | ||||||||| ||||| ||| | Sbjct 73224 TTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCGATCGCGTTGAAC--A 73281 Query 133141 CGGAGT--TTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198 | | | ||| | || | || | ||| |||||||| || ||| ||||| || Sbjct 73282 GGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGCGAGTACATCTCGC 73341 Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258 ||| ||||||||||| || || ||||| ||||| ||||| || ||||| |||||||| Sbjct 73342 TGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCCTCCGTCACCTGCA 73401 Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318 | || || ||| ||||| |||||||| ||||| ||||| ||||| |||||| || | Sbjct 73402 CCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTCCGAGGCGGCAAAGA 73461 Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGC 133377 |||||||||||||| |||||| || |||||| | ||| |||| |||||||| | Sbjct 73462 AGGCCAGCACGTGCGAGATGAAGTGACGCTCGCTCGGCTTC-AGCGAATCCCAGTCCTTC 73520 Query 133378 GTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||||||| || ||||||||||| || |||||||| || || || || || Sbjct 73521 ATGTCCTTCGAGAGGTCCACCTCTTCCACGGTCCAGAAGGAAGCTTCCGC 73570 >seq490 Length=13136524 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| |||||||| | || |||||| | | Sbjct 5732713 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 5732772 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | || |||| | || | || |||| ||||| |||||||| |||||| || | Sbjct 5732773 GACACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATC 5732830 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| |||||||||||||| |||| || || || |||||||| Sbjct 5732831 AGCAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTGTCCGACTACA 5732890 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||| |||| ||||| || ||| || | || || Sbjct 5732891 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732939 Score = 132 bits (146), Expect = 5e-26 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| |||||||| | || |||||| | | Sbjct 5732485 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 5732544 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | || |||| | || | || |||| ||||| |||||||| |||||| || | Sbjct 5732545 GACACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATC 5732602 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| |||| || || || |||||||| Sbjct 5732603 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACA 5732662 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||| |||| ||||| || ||| || | || || Sbjct 5732663 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732711 Score = 129 bits (142), Expect = 6e-25 Identities = 176/239 (74%), Gaps = 5/239 (2%) Strand=Plus/Plus Query 38235 TTTaaaaaa-aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGT 38293 |||||| | ||||| || ||||| || ||| | || ||||| |||||||| | || || Sbjct 5730901 TTTAAATAGGATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACCATCACTCTGGAGGT 5730960 Query 38294 CGAGGCCACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTC 38352 |||| | | |||| | || |||| | || | || |||| ||||| |||||||| | Sbjct 5730961 CGAGCCGTCGGACACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-C 5731018 Query 38353 CCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411 ||||| || || ||||| || || | ||| ||||| |||||||| |||| || || || Sbjct 5731019 CCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTG 5731078 Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| ||||| |||| |||| ||||| || ||| || | || || Sbjct 5731079 TCCGACTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5731137 Score = 127 bits (140), Expect = 2e-24 Identities = 167/226 (74%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 38247 CAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGAC 38306 || || ||||| || ||||| || ||||| |||||||| | || |||||| | | ||| Sbjct 5732260 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5732319 Query 38307 A-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAAC 38364 | | || |||| | || | || |||| ||||| |||||||| |||||| || || | Sbjct 5732320 ACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATCAGC 5732377 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 |||| || || | ||| ||||| |||||||| |||| || || || ||||||||||| Sbjct 5732378 AGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACA 5732437 Query 38425 TCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| ||||| |||| |||| ||||| || ||| || | || || Sbjct 5732438 TCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732483 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||||||||| || || ||||| ||||| ||||||||| ||| | Sbjct 10201652 ATGCAGATTTTTGTAAAAACGCTAACCGGAAAAACGATCACGCTCGACGTCGCCGCCTCG 10201593 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | || | | | ||| |||||| || ||||| ||| | | |||||| Sbjct 10201592 GAAACGGTTCTAGATATCAAAAGTAAAATCGAGGAACGCGAGGGTATTGCACCAGACCAA 10201533 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| |||| | ||| ||||| ||||||||||| | || | || ||| |||||| Sbjct 10201532 CAGCGCATCATCTTCGCCGGCAAGCAGCTGGACGATGGCCGAATTATCTCCGATTACAAC 10201473 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| | | | ||||| ||||| |||||||||| |||| || ||| Sbjct 10201472 ATCCAGCACGGATCGACGATGCATCTGGTGCTGCGGTTGAAGGGTGGC 10201425 >seq934 Length=8401807 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| || | Sbjct 268649 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACGCTTGAGGTCGAGCCCTCG 268590 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | || |||| ||||| |||||||| ||| | || || Sbjct 268589 GACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCAG 268530 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| |||||||| || | ||||| || ||||||||| Sbjct 268529 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 268470 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| |||||| |||| || || |||||||| || Sbjct 268469 ATCCAGAAGGAATCGACCCTTCACTTGGTGCTCCG 268435 >seq712 Length=12093160 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| |||||||| || || || ||| | || |||||| || Sbjct 3459796 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACGATTACCCTTGAGGTCGAGCCC 3459737 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359 | || | | | | | || | || |||| ||||| ||||| || ||||||| | Sbjct 3459736 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTAT-CCCGCCGGA 3459678 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| ||||| | ||| ||||| |||||||| || | ||||| || |||||| Sbjct 3459677 TCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTA 3459618 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| |||| || ||| |||||||||| Sbjct 3459617 CAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCG 3459579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500164884765440