Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq302 439 2e-118
seq490 138 1e-27
seq934 136 4e-27
seq712 131 2e-25
>seq302
Length=5740867
Score = 439 bits (486), Expect = 2e-118
Identities = 526/710 (74%), Gaps = 6/710 (1%)
Strand=Plus/Plus
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
|||| || |||||||||||||||||||| |||||||| ||||| || | || |||
Sbjct 72864 AGCAACCGATCGGCCACGAACTCGATGTACTGCGACATCAGATCGCAGTTCATACCGAGC 72923
Query 132781 AGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACG 132840
| | ||||| ||||| | || || || |||||||| |||||||| ||| || |
Sbjct 72924 ATATCAACCGGGAGCGCCTTCGTCAGGAACTCCTGCTCGATTGCGACCGCATCGCGGATG 72983
Query 132841 ATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCA 132900
|||||| | |||||| || ||||| ||||||| || |||||||| ||| |||
Sbjct 72984 ATTTCCGTCACGCGCTCCTTCGTCGGCTTCTGCACCAGATAGCGGAACATCAGGCAGGCA 73043
Query 132901 AAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGC 132960
|| || || |||| |||||||| | || || | ||||| ||| |||| || |||
Sbjct 73044 AAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAGAACGTCAGACCCGGC 73103
Query 132961 ATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCC 133020
|| ||||| || || || ||||| || ||||| ||||| || || ||||||| ||||
Sbjct 73104 ATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGAAGATGCCC 73163
Query 133021 TCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAG 133080
|||||||| ||||| ||||||| |||||||| || |||| | ||||| | |||||||
Sbjct 73164 TCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGCTTGCTCGAGATCCAG 73223
Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140
||||||||| |||||||| | || |||||||| | ||||||||| ||||| ||| |
Sbjct 73224 TTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCGATCGCGTTGAAC--A 73281
Query 133141 CGGAGT--TTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCG 133198
| | | ||| | || | || | ||| |||||||| || ||| ||||| ||
Sbjct 73282 GGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGCGAGTACATCTCGC 73341
Query 133199 AGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCA 133258
||| ||||||||||| || || ||||| ||||| ||||| || ||||| ||||||||
Sbjct 73342 TGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCCTCCGTCACCTGCA 73401
Query 133259 CTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAA 133318
| || || ||| ||||| |||||||| ||||| ||||| ||||| |||||| || |
Sbjct 73402 CCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTCCGAGGCGGCAAAGA 73461
Query 133319 AGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCAGTCGCGC 133377
|||||||||||||| |||||| || |||||| | ||| |||| |||||||| |
Sbjct 73462 AGGCCAGCACGTGCGAGATGAAGTGACGCTCGCTCGGCTTC-AGCGAATCCCAGTCCTTC 73520
Query 133378 GTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427
||||||| || ||||||||||| || |||||||| || || || || ||
Sbjct 73521 ATGTCCTTCGAGAGGTCCACCTCTTCCACGGTCCAGAAGGAAGCTTCCGC 73570
>seq490
Length=13136524
Score = 138 bits (152), Expect = 1e-27
Identities = 171/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| |||||||| | || |||||| | |
Sbjct 5732713 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 5732772
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | || |||| | || | || |||| ||||| |||||||| |||||| || |
Sbjct 5732773 GACACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATC 5732830
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| |||||||||||||| |||| || || || ||||||||
Sbjct 5732831 AGCAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTGTCCGACTACA 5732890
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| |||| |||| ||||| || ||| || | || ||
Sbjct 5732891 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732939
Score = 132 bits (146), Expect = 5e-26
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||||| || ||||| |||||||| | || |||||| | |
Sbjct 5732485 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 5732544
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | || |||| | || | || |||| ||||| |||||||| |||||| || |
Sbjct 5732545 GACACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATC 5732602
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| ||||| |||||||| |||| || || || ||||||||
Sbjct 5732603 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACA 5732662
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| |||| |||| ||||| || ||| || | || ||
Sbjct 5732663 ACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732711
Score = 129 bits (142), Expect = 6e-25
Identities = 176/239 (74%), Gaps = 5/239 (2%)
Strand=Plus/Plus
Query 38235 TTTaaaaaa-aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGT 38293
|||||| | ||||| || ||||| || ||| | || ||||| |||||||| | || ||
Sbjct 5730901 TTTAAATAGGATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACCATCACTCTGGAGGT 5730960
Query 38294 CGAGGCCACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTC 38352
|||| | | |||| | || |||| | || | || |||| ||||| |||||||| |
Sbjct 5730961 CGAGCCGTCGGACACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-C 5731018
Query 38353 CCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTC 38411
||||| || || ||||| || || | ||| ||||| |||||||| |||| || || ||
Sbjct 5731019 CCGCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTG 5731078
Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||| ||||| |||| |||| ||||| || ||| || | || ||
Sbjct 5731079 TCCGACTACAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5731137
Score = 127 bits (140), Expect = 2e-24
Identities = 167/226 (74%), Gaps = 4/226 (2%)
Strand=Plus/Plus
Query 38247 CAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGAC 38306
|| || ||||| || ||||| || ||||| |||||||| | || |||||| | | |||
Sbjct 5732260 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5732319
Query 38307 A-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAAC 38364
| | || |||| | || | || |||| ||||| |||||||| |||||| || || |
Sbjct 5732320 ACGATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAAT-CCCGCCAGATCAGC 5732377
Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424
|||| || || | ||| ||||| |||||||| |||| || || || |||||||||||
Sbjct 5732378 AGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACA 5732437
Query 38425 TCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||| ||||| |||| |||| ||||| || ||| || | || ||
Sbjct 5732438 TCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732483
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || ||||||||||| || || ||||| ||||| ||||||||| ||| |
Sbjct 10201652 ATGCAGATTTTTGTAAAAACGCTAACCGGAAAAACGATCACGCTCGACGTCGCCGCCTCG 10201593
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | || | | | ||| |||||| || ||||| ||| | | ||||||
Sbjct 10201592 GAAACGGTTCTAGATATCAAAAGTAAAATCGAGGAACGCGAGGGTATTGCACCAGACCAA 10201533
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| |||| | ||| ||||| ||||||||||| | || | || ||| ||||||
Sbjct 10201532 CAGCGCATCATCTTCGCCGGCAAGCAGCTGGACGATGGCCGAATTATCTCCGATTACAAC 10201473
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| | | | ||||| ||||| |||||||||| |||| || |||
Sbjct 10201472 ATCCAGCACGGATCGACGATGCATCTGGTGCTGCGGTTGAAGGGTGGC 10201425
>seq934
Length=8401807
Score = 136 bits (150), Expect = 4e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||| || |
Sbjct 268649 ATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACGCTTGAGGTCGAGCCCTCG 268590
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | || | || |||| ||||| |||||||| ||| | || ||
Sbjct 268589 GACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCAG 268530
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || ||||| |||||||| || | ||||| || |||||||||
Sbjct 268529 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 268470
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| |||||| |||| || || |||||||| ||
Sbjct 268469 ATCCAGAAGGAATCGACCCTTCACTTGGTGCTCCG 268435
>seq712
Length=12093160
Score = 131 bits (144), Expect = 2e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| ||||| |||||||| || || || ||| | || |||||| ||
Sbjct 3459796 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACGATTACCCTTGAGGTCGAGCCC 3459737
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-A 38359
| || | | | | | || | || |||| ||||| ||||| || ||||||| |
Sbjct 3459736 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTAT-CCCGCCGGA 3459678
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| ||||| | ||| ||||| |||||||| || | ||||| || ||||||
Sbjct 3459677 TCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTA 3459618
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| |||| || ||| ||||||||||
Sbjct 3459617 CAACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCG 3459579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500164884765440
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