Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq413 105 8e-18 seq391 102 1e-16 >seq413 Length=2400050 Score = 105 bits (116), Expect = 8e-18 Identities = 311/467 (67%), Gaps = 22/467 (5%) Strand=Plus/Minus Query 11497 ATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTT 11556 |||| |||||||| || || || ||||| || || | || || || || || ||||| Sbjct 1002475 ATCTGTCGATCGAAGCGCCCCGGTCGGAGGAGTGCCTTGTCCAGGATGTCCACGCGGTTC 1002416 Query 11557 GTAGCGGCAATGACTACAATGCC---AGTCTCATTGTCGAAACCGTCCATTTCTGTGAGA 11613 || ||||| | || || | | |||| |||| || |||||||| || || Sbjct 1002415 GTCGCGGCCAGTACCACCACGTTCGTAGTCGTATTG---AACCCGTCCATCTCCACCAGC 1002359 Query 11614 AGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAG-GGCATACCA----CCTGCCGA-A 11667 |||||||| | || ||||| | || ||| ||| ||| | | | | ||||| | Sbjct 1002358 AGCTGGTTCA--GTGTGTTCTC-CTGCTCG---GAGTGGCCTCCGAAACTCTTGCCGCCA 1002305 Query 11668 CGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT 11727 |||||| ||||| || ||||| || |||||||| | || |||||| ||| ||| Sbjct 1002304 CGCTTCCGGCCGACCGCATCAATTTCGTCGATGAACAATATGCACGGTGCGTTCTTGCGT 1002245 Query 11728 GCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAG 11787 ||| |||| | || || || ||| || ||| ||||| ||||||||||| | ||| Sbjct 1002244 GCCATCGCGAACATGTCCCGCACGCGCGACGGTCCCACACCGACGAACATCTCCA-GAAA 1002186 Query 11788 TTTGCGGCAGAACACTG-AATGAAGGGAACATTAGACTCACCAG-CGATGGCTCGAGCGA 11845 | | | |||| | ||||| || || || | |||||| | || || || | |||| Sbjct 1002185 CTCCGACCCGGACACGGTGATGAACGGTACGTTCGCCTCACCGGCCGTTGCCTTG-GCGA 1002127 Query 11846 GGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCAC 11905 | || ||||| || ||||| || | || | || | ||| || ||| || || |||| Sbjct 1002126 GCAGTGTCTTGCCGGTACCGGGGGGGCCGGTCAGCATGGCTCCTTTGGGAATTTTCGCAC 1002067 Query 11906 CACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 | | | ||| ||| || ||||| ||||||| |||| |||| Sbjct 1002066 CGAGATCTATGTACTGCTGGGGGTTCTTCAGGAAGTTGACAAACTCC 1002020 >seq391 Length=2819257 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 158472 AGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGT 158531 ||| ||||| || ||||||||||| || || || |||| |||||| ||| ||| | || Sbjct 1162075 AGGCTGTTACGGACGTGTGGCACCACGATCCGGGCTGGCGGTGAAGAACTTCATCGATGT 1162016 Query 158532 TGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCA 158591 ||||| || ||| |||| || || |||| | ||| ||||| || ||||| || Sbjct 1162015 GGGTGCCGGCGTCGTCGACGAGGACTACCGTGGAAATGTCGGCGTCGTGCTGTTCAACCA 1161956 Query 158592 TGGAGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAG 158637 || |||||||||||| |||||||||||||| ||||| ||| Sbjct 1161955 CTCCGAGGCGGACTTTGAGGTGAAGAAGGGTGATCGTATCGCGCAG 1161910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588966679454800