Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq490 152 1e-31 >seq490 Length=13136524 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||||||||| || || |||||||| || | || || | |||||||| Sbjct 10198983 ACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCTTCC 10199042 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || ||||| |||||||| || || ||| Sbjct 10199043 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGA 10199102 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || |||||||| |||||||| || || | |||||| Sbjct 10199103 ATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCACTTCCAGCGTGATGGTCTTT 10199162 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 10199163 CCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191 Score = 116 bits (128), Expect = 8e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | || || || |||||||| || Sbjct 5731107 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 5731048 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || ||||| || || || || ||||| || || || ||| Sbjct 5731047 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5730988 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||||||||| |||||||| || || || || || | ||||| || ||||| || Sbjct 5730987 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAACGTC 5730928 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 5730927 TTCACGAAGATCTGCAT 5730911 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | || || || |||||||| || Sbjct 5732681 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 5732622 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || ||||| || || || || ||||| || || || ||| Sbjct 5732621 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5732562 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||||||||| |||||||| || || || || || | ||||| || |||| || Sbjct 5732561 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 5732502 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 5732501 TTCACGAAGATCTGCAT 5732485 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | || || || |||||||| || Sbjct 5732453 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 5732394 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || ||||| || || || || ||||| || || || ||| Sbjct 5732393 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5732334 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||||||||| |||||||| || || || || || | ||||| || |||| || Sbjct 5732333 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 5732274 Query 195124 TTTACGAA 195131 || ||||| Sbjct 5732273 TTCACGAA 5732266 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || ||||| |||| ||||| | || || || ||||| || || Sbjct 5732909 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGTTTGCCG 5732850 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || ||||| || || || || ||||| || || || ||| Sbjct 5732849 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5732790 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||||||||||| |||||||| || || || || || | ||||| || |||| || Sbjct 5732789 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 5732730 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 5732729 TTCACGAAGATCTGCAT 5732713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109463603515022