Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq934 102 5e-17 seq490 102 5e-17 seq712 96.9 2e-15 >seq934 Length=8401807 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || ||| ||||| ||||| |||||||| || | || |||| ||| Sbjct 268441 ACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCC 268500 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || ||||| || | || | ||||||||||| Sbjct 268501 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGG 268560 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | |||| || || ||| || || | || ||||| || Sbjct 268561 ATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGCGTGATGGTCTTG 268620 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || ||||| || |||||||| Sbjct 268621 CCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 >seq490 Length=13136524 Score = 102 bits (112), Expect = 5e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 |||||||| | || | | |||||||| | || || ||||| ||||| ||||| Sbjct 5732942 TTTCCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 5732883 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || || | ||| | || ||||||||||| ||||| || || || || ||||| ||| || Sbjct 5732882 GACAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGC 5732823 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931 || | ||||||||||| ||||| || ||| | |||| || | ||| Sbjct 5732822 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCG 5732763 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | || ||||| || || || || |||||||| |||||||||||| Sbjct 5732762 ACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATA 5732712 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| || || | ||| | || ||| Sbjct 5732693 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732634 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||| ||| |||| | ||||||||||| Sbjct 5732633 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732574 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || | ||| || || | || ||||| || Sbjct 5732573 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732514 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || |||||||| |||||||||||| Sbjct 5732513 CCAGTCAGCGTCTTCACGAAGATCTGCATA 5732484 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| || || | ||| | || ||| Sbjct 5731119 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5731060 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||| ||| |||| | ||||||||||| Sbjct 5731059 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5731000 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || | ||| || || | || ||||| || Sbjct 5730999 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5730940 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | |||||||| ||||||||||| Sbjct 5730939 CCAGTCAACGTCTTCACGAAGATCTGCAT 5730911 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| || || | ||| | || ||| Sbjct 5732465 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732406 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||| ||| |||| | ||||||||||| Sbjct 5732405 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732346 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| || | ||| || || | || ||||| || Sbjct 5732345 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732286 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTG 34978 || || || |||||||| |||||||| Sbjct 5732285 CCAGTCAGCGTCTTCACGAAGATCTG 5732260 >seq712 Length=12093160 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || |||| |||||||| || ||||| || Sbjct 3459603 TCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 3459662 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || |||| | ||||||||||| |||||| || || || Sbjct 3459663 ATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 3459720 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || || ||| || || | ||| || || || |||||||| || || | Sbjct 3459721 TCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATCGTCTTACCCGTGAGGGTTTTGA 3459780 Query 34969 CAAAGATCTGCATATT 34984 | ||||||||||| || Sbjct 3459781 CGAAGATCTGCATCTT 3459796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628591106448