Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq302 95.1 1e-14 >seq302 Length=5740867 Score = 95.1 bits (104), Expect = 1e-14 Identities = 247/377 (66%), Gaps = 0/377 (0%) Strand=Plus/Plus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 ||||||| || ||||||||||| || ||||||||||| | ||||| || || || Sbjct 73029 AACATCAGGCAGGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAG 73088 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | ||| |||||||| || | || || | |||||| || | || || |||| Sbjct 73089 AACGTCAGACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCA 73148 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 ||||| || || || || || || || || || | || || ||| | | || | Sbjct 73149 CTGAAGAAGATGCCCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGC 73208 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 || | ||||| ||||| ||||| || |||||||| || || || || | || || Sbjct 73209 TTGCTCGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCG 73268 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 || | || || || ||| ||||| | | || || || | || |||| | Sbjct 73269 ATCGCGTTGAACAGGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGC 73328 Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311 |||||| || || | || || || || |||||||| ||||| || || | || Sbjct 73329 GAGTACATCTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCC 73388 Query 19312 TCTGTTATCTGTACTTC 19328 || || | ||| || || Sbjct 73389 TCCGTCACCTGCACCTC 73405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562099904628240