Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq302 136 5e-27 >seq302 Length=5740867 Score = 136 bits (150), Expect = 5e-27 Identities = 198/278 (71%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 ||||||||||||| || || ||||||||||| || || | | |||| || ||| || Sbjct 2686360 CAGATCCTCGTCGGAGAACCCGGTACCGATCTTGCAGATCGTCTGGTACTCCTCGTTCTC 2686301 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCA--CCCCG 197139 | || ||| |||||||| | ||| ||||||| || || || | ||| ||| ||||| Sbjct 2686300 GTCATCGTAGCAGGCGAGCAGGAATCCGCCGTACGTGCCGGTACGCTTGCCCCGTCCCCG 2686241 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | | || |||||||| |||||||| || | ||| | ||||| || ||| |||||| Sbjct 2686240 GT--ACCCACCGATAACGACCAGATCGAGCGAGTCACCGACCCCGGACAGGTAGTCTTTC 2686183 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259 ||||| || | ||| | | |||| || || ||||| || || || | | | ||| Sbjct 2686182 TTCAGCTTCAACCAATTGCGTGATCGTTTCGCGATCTCATACGTAGCCTCGCGGACGAGG 2686123 Query 197260 GTCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGC 197297 || || | ||||| ||||||||| | ||||||| || Sbjct 2686122 GTTTTCACCATCAGTCCCTCGCAGTTGCCCTTCACCGC 2686085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676718890754080