Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq391 297 4e-75 seq302 205 2e-47 >seq391 Length=2819257 Score = 297 bits (328), Expect = 4e-75 Identities = 720/1071 (67%), Gaps = 36/1071 (3%) Strand=Plus/Minus Query 221356 CACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTG 221415 ||||||| || ||||||| |||||| || || | | | ||||| |||| | | Sbjct 156944 CACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCGCA-GCTAG 156886 Query 221416 CGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCG 221473 | || || ||| | | ||||||||||||||| ||| || ||||| || ||| ||||| Sbjct 156885 CTTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGAG-CTTTTGCGCCTCC 156827 Query 221474 GGAGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532 | | | | || | | || || |||| | | || |||| ||||| || ||||| Sbjct 156826 GCACTCTCGTACGGGAAGCCCATCAAGATGAACG-CATCAGCCATACCCTGGACGCCGAT 156768 Query 221533 ACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGA 221591 |||||| || | ||| | | |||| || ||| |||||| ||||| || || ||||| | Sbjct 156767 ACCGATCGGACGGTGGCGCATGTTCGA-GCGCTTCGCTTCCGGCACCGGGTAGAAGTTCA 156709 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 ||||||| | ||||| | ||| | || | || ||| | ||||| |||||||| | Sbjct 156708 CGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGA 156649 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 || | || || |||| | || || || ||| || |||| Sbjct 156648 AATC--ATACGTACG-------GTCGGGCTGG------ACGAACATGTTCAGCGCAATCG 156604 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 ||||||||| ||||| ||||| |||||||| | |||| | ||||| || || | Sbjct 156603 AGGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAAA 156544 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 |||| |||||||||||| || | || | || || ||||||||| ||||||| Sbjct 156543 GGTTAGAGCACTTGATGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCT 156484 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| ||||| | || |||| ||||||| ||| | | | ||| ||| || | Sbjct 156483 TGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGAT 156424 Query 221892 CTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950 | ||| || | ||| | ||| ||||| ||||||||| || || || | | Sbjct 156423 C-CTGCGCCTTTACCTGGCGGATGAAGCGGCCCTC---CTTTTCATAACCCGTGTACAAC 156368 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTG-GCGGGACACATCAG 222009 | || |||| ||| || ||| ||| ||| || ||||| | ||||| ||||||| Sbjct 156367 TTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGG-CACATCAA 156309 Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 |||||| | ||| | | || | ||||||||| || ||||| ||||| ||||| | Sbjct 156308 ACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTA 156249 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 ||| | || || | ||| ||||||| |||| |||||||| ||||||| |||||||| Sbjct 156248 AAACATGTCCCTTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTC 156189 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 ||| | || |||||||||||||||| |||| ||| | || || || ||||| ||||| Sbjct 156188 AAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCC 156129 Query 222190 ACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTT 222249 |||||||| || || || | |||| | | ||| || ||||||||| ||||| Sbjct 156128 GCCCTGATCGACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTT 156069 Query 222250 GGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCA--GA 222306 || ||||| ||||| ||||||| || |||| || | | | ||| Sbjct 156068 CGAAATTCCGTTCGTGCCAGAGATGTACGTTCCCTTCGCCC---GGATGCAGTGCACGTT 156012 Query 222307 CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 || ||||| |||||||| || ||||||| ||||| ||| || ||||| ||| Sbjct 156011 CAGCCCGATGCCACCGGCCGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGAT 155952 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 |||||| || ||| || | | |||||||||| |||||||||| ||| Sbjct 155951 GCCCTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTG 155901 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 221100 CCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACA 221159 |||||| || ||| | ||||||||| || || || ||||| || || | || | ||| | Sbjct 157191 CCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAGA 157132 Query 221160 GGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGG 221219 ||| || ||| |||| |||| |||||||||||||| || || ||||| || | Sbjct 157131 CGTTGGACGTGTACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCG 157072 Query 221220 TGGGCATGGGTGCCACCAGCAGACTGTTGCGCA 221252 | ||||| || || | |||||| |||||||| Sbjct 157071 TCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCA 157039 >seq302 Length=5740867 Score = 205 bits (226), Expect = 2e-47 Identities = 364/528 (69%), Gaps = 10/528 (2%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCC 25569 |||||||| |||||| | || || | ||||||||| | | |||| | |||| | || Sbjct 73556 CTGGACCGTGGAAGAGGTGGACCTCTCGAAGGACATGAAGGACTGGGATTCGCTGAAGCC 73497 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 | ||||| || || || | ||||| |||| |||||||| ||||| || ||||| Sbjct 73496 GAG--CGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCGCCTCGGACGGTATC 73439 Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT 25689 ||||||||||||||| ||| | |||| | ||| |||||| |||||| || Sbjct 73438 GTGAACGAGAATCTGGTGGAGCGCTTCAGCCAGGAGGTGCAGGTGACGGAGGCTCGCTGC 73379 Query 25690 TTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTG 25749 |||||||| || ||||| || || || || |||||| ||| |||| | ||| ||| Sbjct 73378 TTCTACGGGTTTCAGATTGCGATGGAGAACGTGCACAGCGAGATGTACTC---GCTGCTG 73322 Query 25750 ATG---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC 25806 || ||||||||| ||| ||| | || ||||| || ||||| Sbjct 73321 ATCGACACGTACATTCGCGACCCGAAGGAGCGGGAGTACCTGTTCAACGCGATCGAAACG 73262 Query 25807 ATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCT 25866 | || || | |||| |||||| ||||| |||| |||||| ||| || || Sbjct 73261 CTCCCGTGCGTGAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCGAGCAAGCAGGCC 73202 Query 25867 ACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCG 25926 | ||||||||||| |||| || || ||||| || ||||||||||| ||||| || Sbjct 73201 AACTTTGGCGAGCGAGTGGTGGCGTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGAAGC 73142 Query 25927 TTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAAC 25986 || ||||||||||||||||| ||| || || ||||| || ||| || || ||| Sbjct 73141 TTCGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGTCTGACGTTCTCGAAC 73082 Query 25987 GAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| | ||| | |||||||| || ||| | ||||||||||||||| Sbjct 73081 GAGTTGATCTCGCGTGACGAGGGACTGCACTGTGATTTTGCCTGCCTG 73034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928830101031040