Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq302 131 2e-25 >seq302 Length=5740867 Score = 131 bits (144), Expect = 2e-25 Identities = 282/420 (67%), Gaps = 4/420 (1%) Strand=Plus/Plus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||| ||||||| ||| || || | | || || || || |||||||| || || | Sbjct 882669 CTCGACAAACTCACGCACCGAGTGCGTTTCGCCCGTCGCGATGACAAAATCTTCCGGCTG 882728 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 || || || | ||| |||||||| ||||| || || ||| |||| || |||||||| || Sbjct 882729 CTCCTGCTGCATCATCAACCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCG 882788 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT-- 47934 | ||| ||||| || || | | || || |||| ||| || || ||| Sbjct 882789 CTTCGAATCGAGATTACCCAGCTCGACGCACTCCTGCTGACCGAGCGAAAT--CTTCGCC 882846 Query 47935 AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTA 47994 | | | || ||||| || || |||||| | ||||| || | || ||||| || || Sbjct 882847 ACCGAGCGGGTGATCTTGCGCGTCACAAAATTCTCACCCCGCCGGGGTGATTCGTGGTTG 882906 Query 47995 AAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAG 48054 || || || ||| | ||||| |||| ||| | || |||||||| | ||||||||| Sbjct 882907 AACAGGATCCCATTGCAGGCGAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAG 882966 Query 48055 TACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTC 48114 || || || | |||||| | || || || || |||||||| || || | || || Sbjct 882967 TAGCCGTACATCTTTGCACATGCGTACGGCGAGCGCGGATAGAATGGCGTCTTTTCGTTC 883026 Query 48115 TGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174 || || ||||| |||||| || || || || ||||| || || |||| || ||| Sbjct 883027 TGCGGCGTCTCGACCACCTTTCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACC 883086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665483868551120