Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq368 91.5 2e-13 >seq368 Length=3665626 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 14362 GGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGAATCTCAA 14421 ||| || || ||||| ||| |||| ||| ||| | |||||| | ||| ||| Sbjct 2227119 GGACGGCCTGAAGCCGGGCCAGCGGAAGGTGCTGTTCACGTGCTTCAAGCGTAATGACAA 2227060 Query 14422 GGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACCA 14481 | || |||||||||| || ||||||| | || ||||| | ||| ||||||||||| Sbjct 2227059 GCGAGAGGTGAAGGTGGCGCAGCTGGCGGGTTCGGTGGCGGAAATGTCCGCGTACCACCA 2227000 Query 14482 TGGTGAAGTATC-CTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCAA 14540 || ||| ||| ||| || ||||| || || |||| | ||||| ||| | Sbjct 2226999 CGGCGAACAATCGCTTTGC-TCGACGATCGTCAACCTGGCGCAGAACTACGTCGGTAGCA 2226941 Query 14541 ACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGGTAAGG 14600 ||||||| || || || ||| | ||||| || |||||||| | | ||||| |||| Sbjct 2226940 ACAACATCAATCTACTGTTTCCGGGCGGTCAGTTCGGTACGCGGTTGACCGGTGGCAAGG 2226881 Query 14601 AT---GCTTCTCAGACGAGGTACATTTTCAC 14628 || ||| || |||||||||| ||||| Sbjct 2226880 ATAGCGCTAGTC---CGAGGTACATCTTCAC 2226853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596560159286080