Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq379 370 1e-97 seq346 277 2e-69 seq490 176 6e-39 seq324 131 2e-25 >seq379 Length=19898295 Score = 370 bits (410), Expect = 1e-97 Identities = 985/1497 (66%), Gaps = 21/1497 (1%) Strand=Plus/Minus Query 195374 AATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTC 195433 || ||||| ||||||||||| || || ||||| || ||||| || || | || ||||| Sbjct 10186922 AACGACCAGGGAAACCGTACCACGCCGTCGTATGTGGCCTTCACTGACACCGAGCGTCTG 10186863 Query 195434 GTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCG 195493 |||| |||||||| || || ||| || |||||||| | ||| || |||| |||||| Sbjct 10186862 ATTGGCGATGCCGCCAAGAACCAGGTGGCCATGAACCCGACCAACACCATCTTCGACGCG 10186803 Query 195494 AAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGG 195553 |||||||| || ||||| ||||| ||| |||| | ||| || ||| ||||| Sbjct 10186802 AAGCGTCTGATCGGTCGTAAGTTCGACGATCCCGCCATCCAGGCCGACATGAAGCACTGG 10186743 Query 195554 TCTTATGAAGTTGTTCCCGGTGTGGCT----GATAAGCCTATGATTAATGTTGAATTTCA 195609 | | || || || || | | | || || | || | || || | | Sbjct 10186742 CCGTTCGAGGT-------GGAGTCGATCGAGGGCAAACCAAAAATCCAGGTCGAGTACAA 10186690 Query 195610 CGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCG-TCTATGGTGTTGATTAAGATGA 195668 ||||||||||| || ||||| || | | | || |||||| ||| ||||||| Sbjct 10186689 GGGTGAGAAGAAGTCGTTCT-TCCCGGAGGAGGTCAGCTCGATGGTGCTGACGAAGATGA 10186631 Query 195669 AGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTG 195728 |||| || || || | | | |||| || || || | | || || | || || || | Sbjct 10186630 AGGAAACGGCTGAGGCCTACCTGGGCAAGACCGTTACCAACGCCGTCATCACCGTGCCAG 10186571 Query 195729 CTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAA 195788 | ||||||| || || || || |||||||| ||||| || | | || | || |||| Sbjct 10186570 CGTACTTCAACGACTCGCAGCGTCAGGCGACGAAGGATGCCGGAACCATCTCCGGACTAA 10186511 Query 195789 ACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGA 195848 || || | || ||||| || || || ||||| || || || || ||||||||||||| Sbjct 10186510 ACGTCCTGCGTATCATCAACGAGCCGACCGCGGCCGCCATCGCGTACGGTCTGGACAAGA 10186451 Query 195849 ACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCT 195908 | | || || || || || ||||||| ||||| || || ||||| || || || | Sbjct 10186450 AGACGGCCGGCGAACGCAACGTGCTGATCTTCGATCTGGGCGGCGGTACCTTCGACGTGT 10186391 Query 195909 CACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATC 195968 | | || || || | || || ||||| || ||| | || || || || || |||| Sbjct 10186390 CGATCCTGTCGATCGATGACGGCATCTTCGAGGTGAAGTCGACCGCCGGAGACACCCATC 10186331 Query 195969 TAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAA 196028 | || ||||| || ||||| ||||| | || || || | || ||| || | Sbjct 10186330 TGGGCGGTGAGGACTTCGACAACCGTCTGGTGAACCACTTCGCTCAGGAATTCAAGCGCA 10186271 Query 196029 AGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTG 196088 | | ||||| ||| | ||| || | || || ||||| || | || || |||| Sbjct 10186270 AACACAAGAAGGATCTGTCTACGAACAAGCGTGCGCTGCGTCGTCTGCGCACGGCTTGTG 10186211 Query 196089 AACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGT 196148 | || || || || || || || || || | || | | | || || |||||| ||| Sbjct 10186210 AGCGCGCGAAGCGCACGCTGTCCTCGTCGACGCAGGCCAGCATCGAAATCGATTCGCTGT 10186151 Query 196149 TTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTG 196208 | || |||| || ||||| || | || || ||||| ||||| || ||| | ||| | | Sbjct 10186150 TCGAGGGAACCGATTTCTACACCTCGATCACGCGTGCTCGTTTCGAGGAGCTGAACGCCG 10186091 Query 196209 ATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATA 196268 || | || | | ||||| || || || | | || |||||||| |||||||| | Sbjct 10186090 ATCTATTCCGCTCGACGATGGAGCCGGTGGAGAAGGCGCTGCGTGACGCCAAGATGGACA 10186031 Query 196269 AGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAAC 196328 || | | | |||| || || || || || ||||| |||||||| |||||| | || Sbjct 10186030 AGGCCAGCATCCATGACATCGTGCTGGTCGGCGGATCGACCCGTATCCCGAAGGTGCAGA 10185971 Query 196329 AGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAG 196388 | |||| ||||||||| || || || ||||| |||||||||||||||| | Sbjct 10185970 AACTGCTGCAGGACTTCTTCAACGGCAAGGAGTTGAACAAGTCGATCAACCCGGATGAGG 10185911 Query 196389 CAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAA---TAATA 196445 | || || || ||||| || || ||||| || | ||| || | |||||| | Sbjct 10185910 CCGTCGCGTACGGTGCCGCTGTGCAGGCCGCCA-TCTTGCA--CGGTGACAAGTCGGAGG 10185854 Query 196446 ACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGG 196505 | || || ||||| ||||| || || || | || | || || ||| | || || || | Sbjct 10185853 AGGTGCAGGATCTGCTGCTGCTCGACGTGACGCCGCTGTCGCTCGGTATCGAGACGGCCG 10185794 Query 196506 GTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAG 196565 |||| || ||| | |||| | | ||||| || || ||||| ||| || || Sbjct 10185793 GTGGAGTCATGTCCGTGCTTATCAAGCGAAACACGACCATCCCGACGAAGCAGACGCAGA 10185734 Query 196566 TCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAAC 196625 || | || || || || || || || ||||| | || || || | || || || | Sbjct 10185733 CGTTCACCACCTACTCGGACAACCAGCCCGGTGTGCTGATCCAGGTGTTCGAGGGCGAGC 10185674 Query 196626 GCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCT 196684 | | || || | ||||| ||| |||| || || | ||||| ||| || || ||| | Sbjct 10185673 G-TGCCATGACGAAGGACAACAATCTGCTGGGCAAGTTCGAGCTGAGCGGCATCCCACCG 10185615 Query 196685 GCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTA 196744 || || | || || ||||||||| | || |||||||| || || || || || || Sbjct 10185614 GCGCCGCGTGGCGTCCCACAGATTGAGGTCACTTTCGATATCGATGCGAACGGCATCCTG 10185555 Query 196745 AACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGAC 196804 ||||| || ||| || ||| | | ||| | |||||| || || || ||| Sbjct 10185554 AACGTGACGGCTCTAGAGAAGTCGACGAACAAGGAAAACAAGATTACCATCACGAACGAC 10185495 Query 196805 AAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTAC 196861 ||||| || || |||||||| || || || ||||| | || || || |||||| Sbjct 10185494 AAGGGCCGTCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGGCCGAGAAGTAC 10185438 >seq346 Length=4026748 Score = 277 bits (306), Expect = 2e-69 Identities = 799/1222 (65%), Gaps = 12/1222 (1%) Strand=Plus/Plus Query 195644 TCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTG 195703 ||||| |||||| ||| ||||||||||| || || ||| | | | |||| || | | Sbjct 3057792 TCGTCGATGGTGCTGACCAAGATGAAGGAAACGGCCGAAGCGTACCTGGGCAAGAGCATC 3057851 Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763 | || || | || || || || ||||||| ||||| || || ||||| || ||| Sbjct 3057852 GCCAACGCGGTCATCACGGTGCCGGCCTACTTCAACGATTCGCAGCGTCAGGCAACGAAG 3057911 Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCT 195823 ||||| | ||| || || || || ||| || | || ||||| ||||| || ||||| Sbjct 3057912 GACGCCGGTGCGATCGCCGGGCTGAACGTGCTGCGCATCATCAACGAACCGACGGCGGCG 3057971 Query 195824 GCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGAT 195883 || ||||| || |||||||||||||| || || || || || ||||||| ||| Sbjct 3057972 GCCATTGCGTACGGTCTGGACAAGAAGGTGGGCGGTGAGCGTAACGTGCTGATCTTCGAT 3058031 Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943 || || ||||| || || || || || | || | || || | || || |||||||| Sbjct 3058032 CTGGGCGGTGGCACCTTCGACGTGTCGATCCTGACGATCGAGGACGGCATCTTCGAAGTG 3058091 Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT 196003 ||| | || || ||||| || ||||| || || ||||| ||||| || | | Sbjct 3058092 AAGTCGACCGCCGGTGACACGCATCTGGGCGGCGAAGACTTCGACAACCGCATGGTGTCG 3058151 Query 196004 CATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCT 196063 || || || |||||| || ||| | ||||| || || | | || |||| Sbjct 3058152 CACTTCGTGGAGGAGTTCAAGCGCAAGCACAAGAAGGACATCACGAGCAACAAGCGGGCC 3058211 Query 196064 CTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAA 196123 || || ||||| | || || || || || || || || || || || | || | || Sbjct 3058212 CTGCGCCGGCTGCGTACGGCTTGCGAGCGGGCGAAGCGTACGCTTTCCGCGTCGACCCAG 3058271 Query 196124 ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGT 196183 | | ||||||| |||||| ||| || || || || ||||| || | || || | Sbjct 3058272 GCCAGCATTGAGATCGATTCGCTGTACGAGGGTATCGATTTCTACACCTCGATCACGAGG 3058331 Query 196184 GCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACC--TGTTGAAC 196241 || ||||| || ||| | ||||| || |||| | | |||||||| ||| || Sbjct 3058332 GCCCGTTTCGAGGAGCTGAACTCGGACCTGTTCCGCGACACGATGGAACCGGTGTCGA-- 3058389 Query 196242 AAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAG 196301 | | || || || || |||||||| ||| | | | | || || || || || || | Sbjct 3058390 AGGCGCTGCGCGATGCGAAGATGGACAAGGCGAGCATCCACGACATCGTGCTGGTCGGTG 3058449 Query 196302 GATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATT 196361 |||| ||||| || |||||| | || || |||| ||||||||| || || Sbjct 3058450 GATCGACCCGCATCCCGAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGCAAGGAGC 3058509 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 | ||||| |||||||||||||||| || || || || ||||| || || ||||| || | Sbjct 3058510 TGAACAAGTCGATCAACCCGGATGAGGCCGTCGCGTACGGTGCCGCGGTGCAGGCCGCCA 3058569 Query 196422 TTCTCTCAGGTGTTGACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCAC 196478 |||| ||| | ||||| | || || ||||| ||||| || || ||| | | Sbjct 3058570 TTCT-GCAG--GGTGACACGTCGGAGGCGGTGCAGGATCTGCTGCTGCTGGACGTTACGC 3058626 Query 196479 CCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACA 196538 | | || || || | || || || ||||| || ||||| | || | | |||| Sbjct 3058627 CGCTGTCGCTCGGCATCGAGACGGCCGGTGGCGTGATGACGGTGCTGATCAAGCGCAACA 3058686 Query 196539 CAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTG 196598 | || || ||||| ||| || ||| || | ||||| || || || || || || | Sbjct 3058687 CCACGATCCCGACGAAGCAGACGCAAACGTTCACCACGTACTCGGACAACCAGCCCGGCG 3058746 Query 196599 TTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAA 196658 | | || || || | ||||| || ||| | | ||||| ||| |||| || || | Sbjct 3058747 TGCTGATCCAGGTGTTCGAAGGGGAGCGCGCGATGACGAAGGACAACAATCTGCTGGGCA 3058806 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||||| ||| || || || | || || | || || || ||||| | ||| | Sbjct 3058807 AATTCGAGCTGAGCGGCATCCCGCCGGCGCCGCGTGGCGTGCCCCAGATCGAGGTTACGT 3058866 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 |||| || ||||| || || || | ||||| | || || ||| | | | || Sbjct 3058867 TCGACATCGACGCGAACGGCATCATGAACGTGTCGGCCATCGAGAAGTCCACCAAC-AAG 3058925 Query 196779 CTGAAAAG-ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 ||| | || || ||||| |||||||| || || |||||||| || || || Sbjct 3058926 GAGAACCGCATCACCATCACCAACGACAAGGGCCGCCTCAGCAAGGAGGACATCGATCGG 3058985 Query 196838 ATGGTTCAAGATGCGGAAAAGT 196859 ||||| | || ||||| |||| Sbjct 3058986 ATGGTGAACGAGGCGGAGAAGT 3059007 >seq490 Length=13136524 Score = 176 bits (194), Expect = 6e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||||| || ||||| || ||||| || || || ||| | || Sbjct 10199191 ATGCAAATCTTCGTCAAGACCCTGACCGGAAAGACCATCACGCTGGAAGTGGAGCCATCG 10199132 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || |||||||| |||||||||||||| || || |||||| Sbjct 10199131 GACACTATCGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCGGATCAG 10199072 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| |||||||| |||||||| | || ||||| Sbjct 10199071 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTGTCAGACTACAAT 10199012 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| ||||| || || || || | || || ||||| Sbjct 10199011 ATCCAGAAGGAGTCCACTCTCCATCTGGTGCTCCGTCTGCGAGGTGG 10198965 >seq324 Length=4683486 Score = 131 bits (144), Expect = 2e-25 Identities = 448/691 (65%), Gaps = 17/691 (2%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 ||||||||| | || || || ||||| || || ||||| | | || | ||| || || Sbjct 3585462 GGTATCGATCTTGGCACGACGTACTCCTGCGTCGGTGTGTACAAGAACGGTCGCGTCGAA 3585521 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || || || || ||||||| || || || ||||| || || || | | Sbjct 3585522 ATCATCGCCAACGATCAGGGTAACCGTATCACGCCGTCCTACGTGGCATTCACCGCCGAC 3585581 Query 195425 G---AACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | | |||||| | || || ||||| || || ||| | | |||||| || || Sbjct 3585582 GGCGAGCGTCTCATCGGCGACGCCGCCAAGAACCAGCTGACGACGAACCCGGAGAACACG 3585641 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| |||||||||||||| || ||||| | || | || | | || || |||| Sbjct 3585642 GTCTTCGACGCGAAGCGTCTGATCGGTCGTGAATTCACCGACCACACCGTGCAGCACGAC 3585701 Query 195542 ATAAAGGACTGGT-CTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA--T 195598 || ||| ||| | | | ||| || | | | || |||| || | | Sbjct 3585702 ATCAAG--CTGCTGCCGTTCAAGGTGATTGAGAAGAACTCGA--AGCCACACATCAGGGT 3585757 Query 195599 GTTGAATTTC-ACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | | || || ||| || || || || || || || | |||||| | Sbjct 3585758 GTCGACCGGCCAGGGCGACAAGGTG---TTCGCCCCGGAGGAGATCTCCGCCATGGTGCT 3585814 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||| || || || | | | |||| || | |||| | || || || Sbjct 3585815 GGGCAAGATGAAGGAAACGGCCGAGGCGTACCTGGGCAAGAAGGTGACGCACGCTGTCGT 3585874 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||||| || | || || ||||| || |||||||| | | || Sbjct 3585875 GACCGTGCCGGCCTACTTCAACGACGCGCAGCGTCAGGCTACGAAGGACGCGGGAACGAT 3585934 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || | | | || ||||| ||||| || || || || || || ||||| Sbjct 3585935 CGCCGGACTGGTGGTTATGCGCATCATCAACGAACCGACCGCCGCCGCCATCGCCTATGG 3585994 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 |||||||||| ||||||| || || || || | | || ||||| ||||| ||||| Sbjct 3585995 TCTGGACAAG---AAGGACGGTGAGAAGAACGTGCTCGTGTTCGATCTGGGTGGCGGTAC 3586051 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 || || || || || || | || || ||| | ||||| || ||| || || Sbjct 3586052 CTTCGACGTGTCGCTGCTGACCATCGACAACGGTGTGTTCGAGGTGGTGGCCACCAACGG 3586111 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||| || ||||| || ||||| || |||||| Sbjct 3586112 TGACACCCATCTGGGCGGTGAGGACTTCGAT 3586142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657851989327520