Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq368 140 1e-27 seq402 91.5 4e-13 >seq368 Length=3665626 Score = 140 bits (154), Expect = 1e-27 Identities = 189/261 (72%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||||| ||||||||| |||||||| ||| | || || ||||| ||| Sbjct 3060550 TCCATAGCCTTGATTAGACGACGCTGGATATAACCGGTTTCGGCCGTCTTGACAGCGGTA 3060491 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || | ||| ||||||||||||| || |||||| | | ||| ||| ||| ||||| Sbjct 3060490 TCGATCAAACCCTCACGACCACCCATGGCGTGGAAGTAGAACTCGGTCGG-CGTCAGCCC 3060432 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 ||| | ||| | || ||||||||||||| |||||| | |||| |||| | || Sbjct 3060431 GGCAAGGTACGAGTTTTCCACGAAACCACGCGACTCGGGACCGTAGTCGTCCTTGATGAA 3060372 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 || |||||||| | || | ||| | ||||| ||||| || || ||||||||||| Sbjct 3060371 ATGGGGCAGGGTGCGCTTGCGGAACCCGAACGGGATGCGCTTACCCTCGACGTTCTGCTG 3060312 Query 302814 TCCCAGGCACGAAATCATCTG 302834 || | || | ||| | ||| Sbjct 3060311 ACCGACACAAGCAATAACCTG 3060291 >seq402 Length=2654352 Score = 91.5 bits (100), Expect = 4e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| |||||| |||||| |||||||| ||||||||||| | |||||||| || Sbjct 275973 GCACCGTGCGAAATCTGACAATCGCGCTCCATCTCACCGAAACGCAACCCACCATCACGT 276032 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| ||||| || |||| | || || ||| | || ||| Sbjct 276033 GCACGACCCTCCATCGGCTGGCGGACGAGAATCTGCACCGGGCCGCGCGCACGCGAATGG 276092 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||| || | ||||| ||||| |||||||||||| | | || |||| ||||| Sbjct 276093 ATCTTGTCGTCCACCATGTGCTTCAGACGCTGGTAGTAGGTCGGGCCGAGGAAGA 276147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471793726198642