Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq391 363 1e-95 seq934 145 7e-30 seq712 123 2e-23 seq490 120 3e-22 >seq391 Length=2819257 Score = 363 bits (402), Expect = 1e-95 Identities = 1217/1869 (65%), Gaps = 69/1869 (4%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| || || || |||| || |||| |||| || || || | || ||| ||||| || Sbjct 157523 TTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCC 157464 Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 || || | ||||| |||| | |||| | ||| || || || || |||| ||| Sbjct 157463 AGTCTTCAGGCCCATCTTCC-ACGCGTGGAAGTGCATTGACGTCAGCTTGCCGTAGTTCG 157405 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 ||| ||||| ||||| ||||| || |||||||||||| || || || || | Sbjct 157404 GTTCCGCCACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTCGGCTG 157345 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||| | || | |||| |||||||| || || ||||| ||||| || | | Sbjct 157344 CCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTT 157285 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 ||||||| | | || || || || |||||| || | ||| || ||| Sbjct 157284 CCTTCGGTATTTGTTCGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGTTCTTCA 157225 Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511 | ||||||| ||||| | || ||| || || ||||| | ||| | |||| Sbjct 157224 TATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCT 157165 Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571 |||| || || | || || || || ||| | |||| ||| | ||||| ||||| | Sbjct 157164 GAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCTCGAACGACT 157105 Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631 ||||||| |||| ||| || ||||| | || |||||||| ||| | || || || | Sbjct 157104 CGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGT 157045 Query 138632 TCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688 | || | |||||| ||| || |||||| |||| || ||| | ||||| || Sbjct 157044 TGCGCACACCGTGT---TTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAGGTCCG 156988 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748 | ||| ||||||||||| |||||||| | || ||| || | ||| ||||||| Sbjct 156987 TCGGTACCTTGTTCCACATGTCGTACTGCAGAATACCCTTGCTCACCGGAGATCCTTCGT 156928 Query 138749 ACGAATCGTATACACCAAACTCTTGCGC---CAACTCGTTGCTCGCCTCGAGCGCACCAT 138805 ||| ||||| || ||| || || || |||| ||| || || |||||||||| Sbjct 156927 ACGTCTCGTACGGTCC---CTCCTGAGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCAT 156871 Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865 |||| || || || ||||||||||||||| | | ||||| || ||||||||||| | Sbjct 156870 AGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGCGCCTCCGCACTCTCGTACGGGA 156811 Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925 || | || ||||||| || |||| || || ||||| | |||| || || |||| Sbjct 156810 AGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGC 156751 Query 138926 GCAGATTTGA-CGCTT---TTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981 ||| || || ||||| || |||| | || || |||| || ||||| || ||| Sbjct 156750 GCATGTTCGAGCGCTTCGCTTCCGGC----ACCGGGTAGAAGTTCACGTCGATAATCTTG 156695 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCC 139040 || || || ||| || | || | | |||| | | | | ||||| || || | Sbjct 156694 TTCAAGTTGCGCGTCACGA-TTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGTAC- 156637 Query 139041 CCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACAC 139100 |||| | | | ||| || |||| | ||||||||| | ||||||||| Sbjct 156636 -----GGTCG--GGC----TGGACGAACATGTTCAGCGCAATCGAGGCCAGGTTGCACAC 156588 Query 139101 CGCCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGA 139159 ||||||||||| | | || ||| || ||||| |||| || | ||| ||||||| Sbjct 156587 CGCCACTTCGTCCTTCGACG-AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGA 156529 Query 139160 TCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACG 139219 | || || | |||||||| |||||||| || || || || || ||||| ||||| |||| Sbjct 156528 TGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 156469 Query 139220 GTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTT 139279 || ||| || ||||| || | || || || ||| ||| || | || | Sbjct 156468 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATCCTGCGCCTTTACCT 156409 Query 139280 GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC---------GTAGAGTTCGTCGAATC 139330 | || | | ||| || || ||| |||||| ||| | | ||||| Sbjct 156408 GGCGGA--TGAAG--CG--GCCCTC---CTTTTCATAACCCGTGTACAACTTCTCGAACT 156358 Query 139331 GTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGC 139390 ||| || | | || | | || |||| | || || ||||| | ||| Sbjct 156357 CTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTT 156298 Query 139391 CGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC 139450 ||||||||| |||||| ||||||||||||||| ||||| | ||| | | || || | Sbjct 156297 CGTTCGCCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTCCC 156238 Query 139451 GCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAG 139510 || | || ||| || |||| |||| | | || ||||| || || Sbjct 156237 TTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATCGC 156178 Query 139511 CGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGA 139567 ||||||| || ||||| |||||||| | || ||| ||| ||||| || ||||||| Sbjct 156177 CGTGCCACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATCGA 156118 Query 139568 CGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGT 139627 ||| ||| | | ||| ||| | ||||||| |||||| ||| ||| ||| |||||| Sbjct 156117 CGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCCGT 156058 Query 139628 TGGTGCTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCC 139685 | |||| | ||| | || ||| | || |||| | || || || | ||||| || Sbjct 156057 TCGTGCCAGAGAT-GTAC-GTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCC 156000 Query 139686 GCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGC 139744 ||| | | ||||| || | |||| | || | | || ||||| || || |||| Sbjct 155999 ACCGGCCGACTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAGATGCCCTCGATGC 155941 Query 139745 TGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTG 139804 ||||||| ||| || | ||||||||| ||||| || || || | | |||| | || | Sbjct 155940 TGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTGGCCGCCG 155881 Query 139805 CAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGA 139864 | |||| || || || || || || | | ||| | || | |||||| |||| Sbjct 155880 CGAACATGGTCGGCGAAGCATGGGTAAAGTAACGCTCCGAGAGCAGATTGTACGTCTCGA 155821 Query 139865 TGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGA 139924 | || | | || ||| | |||||||| |||| | ||| |||||||||||||| || Sbjct 155820 TCGCTGCCTCGATGTCCGTGCCGTGGATGCCGATGGCGACGCGCATCAGCATATGCTGCG 155761 Query 139925 TCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTA 139982 || ||| | | | ||||| ||| || || ||| | || ||| ||||| ||| | Sbjct 155760 GCCTCTCGACAATCTTGCCCTTGATCTTCAACAAATACGAACG--CTCCAGGGTTTTGAA 155703 Query 139983 GCCAAAGTA 139991 ||| || || Sbjct 155702 GCCGAAATA 155694 >seq934 Length=8401807 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || ||||| || || || ||||| || || || || | Sbjct 268650 GATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACGCTTGAGGTCGAGCCCTC 268591 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || |||||||| ||||| || ||||| || || ||||| Sbjct 268590 GGACACGATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGATCA 268531 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||||||||| || |||||||||||| | | |||| || || || Sbjct 268530 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAA 268471 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||||||||| || ||||||||| | ||| | || || || Sbjct 268470 CATCCAGAAGGAATCGACCCTTCACTTGGTGCTCCGACTCCGTGGTGG 268423 >seq712 Length=12093160 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 3459794 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACGATTACCCTTGAGGTCGAGCCCTC 3459735 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || || || || || ||||| Sbjct 3459734 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGATCA 3459675 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| ||||| || |||||||||||| | | |||| || || || Sbjct 3459674 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTACAA 3459615 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || ||||| |||| ||||||| || Sbjct 3459614 CATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 3459567 >seq490 Length=13136524 Score = 120 bits (132), Expect = 3e-22 Identities = 171/240 (71%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || || || || || || | | Sbjct 5732713 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 5732772 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 5732773 GACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 5732832 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| |||||||||||||| | | |||| || || ||| Sbjct 5732833 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTGTCCGACTACAAC 5732892 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || || ||||| ||||| | |||||||| | || |||| |||| | ||||||| || Sbjct 5732893 ATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAG--GAAACTGAGTCA 5732950 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 24699 ATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAG 24758 ||| |||||||||||| | || ||| | || || || || || || || || || || Sbjct 5730906 ATAGGATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACCATCACTCTGGAGGTCGAGC 5730965 Query 24759 CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818 | | ||||| | || | || || |||||||| ||||| || ||||| || || | Sbjct 5730966 CGTCGGACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAG 5731025 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878 |||| || ||| ||||||| ||||| || ||||||||||| | | |||| || | Sbjct 5731026 ATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACT 5731085 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| || ||||| ||||| | |||||||| | || |||| ||||| Sbjct 5731086 ACAACATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5731137 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || || || || || || | | Sbjct 5732485 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 5732544 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 5732545 GACACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 5732604 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || ||||||||||| | | |||| || || ||| Sbjct 5732605 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAAC 5732664 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| | |||||||| | || |||| ||||| Sbjct 5732665 ATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732711 Score = 107 bits (118), Expect = 2e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 24707 CAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGAC 24766 |||||||| | || ||||| || || || || || || || || || || | | ||| Sbjct 5732260 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCGGAC 5732319 Query 24767 ACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAA 24826 || | || | || || |||||||| ||||| || ||||| || || ||||| || Sbjct 5732320 ACGATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAG 5732379 Query 24827 CGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATT 24886 ||| ||||||| ||||| || ||||||||||| | | |||| || || ||||| Sbjct 5732380 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACAACATC 5732439 Query 24887 CAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||| | |||||||| | || |||| ||||| Sbjct 5732440 CAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGG 5732483 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | |||||||||||||| ||||| || |||||||| || | ||| | Sbjct 10201652 ATGCAGATTTTTGTAAAAACGCTAACCGGAAAAACGATCACGCTCGACGTCGCCGCCTCG 10201593 Query 24764 GACACAG---TAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 || || | |||| | | ||| || ||| | || || || || | || || Sbjct 10201592 GAAACGGTTCTAGATA---TCAAAAGTAAAATCGAGGAACGCGAGGGTATTGCACCAGAC 10201536 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| || | ||||| ||||| || |||||||| ||| ||| || || ||||| Sbjct 10201535 CAACAGCGCATCATCTTCGCCGGCAAGCAGCTGGACGATGGCCGAATTATCTCCGATTAC 10201476 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 ||||| || | | |||||| | || ||||| |||| ||| Sbjct 10201475 AACATCCAGCACGGATCGACGATGCATCTGGTGCTGCGGTTG 10201434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449890480370480