Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq823 145 6e-30 >seq823 Length=10996211 Score = 145 bits (160), Expect = 6e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 ||||| || || || || ||||| ||||||||||| ||||| || | || || || || Sbjct 1547189 TGCGTCTGAGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGATAGGTAGCGGGGCGACCG 1547130 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| | || | ||| | |||||| ||||| || |||||||||||||| || || || Sbjct 1547129 ATCGCTCTAGCCACTTCCGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCTTTACCC 1547070 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||||||| |||||| ||||| ||||| ||||||||| || | ||| || ||| Sbjct 1547069 TCTACCTTGGCGTTGATGCGAGGCATCTTGTACCGGTAGAACATATCGGTCACGTTACGG 1547010 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || ||||| || || |||| Sbjct 1547009 TTCACGTTTACGGTAGCCAT 1546990 Score = 125 bits (138), Expect = 6e-24 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || || | |||| ||||| | Sbjct 1547801 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTGACCTCGAGCGGACCGTGGAA 1547742 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||| ||||| |||| | ||| || | || || || || || || Sbjct 1547741 GCCGCACGCCTTGCATCCCTGCGAGATCGTACCCTTCTTCGACGAAACTATCAGGTCCGT 1547682 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||||||| || || ||||| |||| || ||| ||| ||||| ||||| |||||||| Sbjct 1547681 CTCCGGGTTATCGCACTCCGGGCACAGGACGAACCGGCGAATGAATCCATCGAGCAGGTC 1547622 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||| | ||| || ||||| | ||||| || ||||| |||||| || |||||| Sbjct 1547621 CTGCAGCTTGGTGGCATCGTGCGCACCGTTCACAATGAAGCGTTCG-TTCTGTAAT 1547567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412835230112138