Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq848 192 9e-43 seq302 149 1e-29 seq799 123 4e-22 seq391 122 1e-21 seq601 120 5e-21 seq1 113 7e-19 seq402 111 2e-18 seq379 104 4e-16 >seq848 Length=3946 Score = 192 bits (212), Expect = 9e-43 Identities = 187/241 (78%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| |||||||||||| ||||||| || ||| ||| Sbjct 3672 TGTACTTGGTGACGGCCTTCGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCACCGGGCA 3613 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||||||||||||||| ||||||| |||||| ||||||||| | Sbjct 3612 GCAGCAGACGCACGGCGGTCTGGATTTCGCGGGACGTGATCGTCGAGCGCTTGTTGTAGT 3553 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| ||| ||||||| ||||||| |||| |||||||| || || ||||| Sbjct 3552 GCGCCAGACGGGACGCCTCGGCCGCGATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 3493 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || |||||||| ||| |||||||| ||||| |||||||||| Sbjct 3492 TGATGCTCATAGCCTTCGACGAGATGCCAGTGTCCGGGTGCACTTGCTTCAGCACCTTGT 3433 Query 1485710 A 1485710 | Sbjct 3432 A 3432 >seq302 Length=5740867 Score = 149 bits (164), Expect = 1e-29 Identities = 233/329 (71%), Gaps = 7/329 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTT-GCTAAAG-CAGAGGCCGGGCATGAGGCCGCGCT 794398 || ||||| || |||||| ||||| | || | |||| || ||||| ||||| |||| Sbjct 73059 CCCTCGTCACGCGAGATCAACTCGTTCGAGAACGTCAGA--CCCGGCATCAGGCCACGCT 73116 Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| ||||| |||||||| ||| || || ||| ||||||||||||||||| || | Sbjct 73117 TCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGAAGATGCCCTCGACGGCAGCGA 73176 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 | | || | |||||| |||| || || | || | |||||| |||| ||||| Sbjct 73177 ACGCCACCACTCGCTCGCCAAAGTTGGCCTG---CTTGCTCGAGATCCAGTTCAGCGCCC 73233 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | || ||||| ||| |||| | || | ||| ||||| ||| || |||| ||| || Sbjct 73234 AGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCGATCGCGTTGAACAGGTACTCCCGCT 73293 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | |||||| | ||| |||||||| || |||||||| |||| ||| | ||| | Sbjct 73294 CCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGCGAGTACATCTCGCTGTGCACGTTCT 73353 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667 | || || ||||| || || || |||||| Sbjct 73354 CCATCGCAATCTGAAACCCGTAGAAGCAG 73382 Score = 93.3 bits (102), Expect = 7e-13 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | || || ||||||| ||||||| | |||| ||||| |||||| ||| Sbjct 73386 GCCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCG 73445 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCG-TCGTCGCTGAG 796268 || |||||| || ||||| || |||||| ||| |||||||||||| ||| | | || Sbjct 73446 TCCGAGGCGGCAAAGAAGGCCAGCACGTGCGAGATGAAGTGACGCTCGCTCGGC-TTCAG 73504 Query 796269 CGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 ||| |||||| | |||| |||||| ||||| || ||||||| ||||| || Sbjct 73505 CGAATCCCAGTCCTTCATGTCCTTCGAGAGGTCCACCTCTTCCACGGTCCAGAAGGAAGC 73564 Query 796329 CTCGGCCT 796336 || |||| Sbjct 73565 TTCCGCCT 73572 >seq799 Length=4356 Score = 123 bits (136), Expect = 4e-22 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||| || || || || ||||||||| |||||| || || ||| Sbjct 2848 TGTACTTGGTGACAGCCTTCGTGCCTTCGGACACGGCGTGCTTGGCCAACTCACCAGGCA 2789 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| || ||||| || ||||| ||||||| |||||| |||||||| | Sbjct 2788 ACAGCAGACGGACGGCCGTTTGGATTTCGCGGGACGTGATCGTCGAACGCTTGTTGTAGT 2729 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| |||| || |||| ||||||| |||| |||||||| || || ||||| Sbjct 2728 GCGCCAAGCGGGATGCTTCGGCAGCGATGCGCTCGAAAATGTCGTTCACGAAGCTGTTCA 2669 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| || || || || || || || || || | |||||||| Sbjct 2668 TGATGCTCATCGCCTTGGAAGAAATTCCGGTATCCGGATGGACTTGTTTCAACACCTTGT 2609 Query 1485710 A 1485710 | Sbjct 2608 A 2608 >seq391 Length=2819257 Score = 122 bits (134), Expect = 1e-21 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||| ||||| || || ||||| | ||| | ||||| ||||| || || | ||||| Sbjct 156128 GCCCTGATCGACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTT 156069 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 || ||||| ||||| | | ||| | ||| || || | |||| || | Sbjct 156068 CGAAATTCCGTTCGTGCCAGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAG 156009 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||||| ||||||| ||||||||| || ||||||| |||||||| ||||||||||| Sbjct 156008 CCCGATGCCACCGGCCGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCC 155949 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGA 2073758 |||||| |||| | |||| || ||||||||| ||||| Sbjct 155948 CTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGA 155907 Score = 118 bits (130), Expect = 2e-20 Identities = 330/498 (66%), Gaps = 14/498 (3%) Strand=Plus/Minus Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312 |||||| || |||||||| || || |||| ||| |||||||| |||||||||||| || Sbjct 157520 GTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCCAGT 157461 Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGAC 2069372 ||| ||||| |||||||| | |||||| ||||| | || ||||| | Sbjct 157460 CTTCAGGCCCATCTTCCACGCGTGGAAGTGCATTGACGTCAGCTTGCCGTAGTTCGGTTC 157401 Query 2069373 GGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCAT 2069432 || || || ||||| |||||| ||| |||| | | | |||||||| ||||| Sbjct 157400 CGCCACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTCGGCTGCCAT 157341 Query 2069433 GTCGATGGTCACGCGGT--TGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGC 2069490 | |||| |||| | || | |||||| || || ||| |||| | | | | Sbjct 157340 CTGGATG--CACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCC 157283 Query 2069491 GGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGA-GGCGGTC 2069549 ||| | | || || | | ||| | ||| || | || | || | | || Sbjct 157282 TTCGGTA-TTTGT-----TCGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGTTC 157229 Query 2069550 GCGAAAGTCGGGCGT-CCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGA 2069608 | | || ||| |||||| ||| ||| ||| || || ||||||| |||| | Sbjct 157228 TTCATA-TC-ATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCA 157171 Query 2069609 CCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGC 2069668 |||| ||| |||||||| || ||||| || |||||| |||| |||| |||| Sbjct 157170 CCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCTCGA 157111 Query 2069669 ACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCA 2069728 ||| |||| ||||||||| || || | ||||| ||||| ||||| |||| | |||| Sbjct 157110 ACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCA 157051 Query 2069729 GCGAGTTGCGCAGGCCGT 2069746 | |||||||||| |||| Sbjct 157050 GTGAGTTGCGCACACCGT 157033 Score = 102 bits (112), Expect = 1e-15 Identities = 128/173 (74%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 2070056 CATGGTAGATCGTCTCAAAGATGGTGCGG-TTGAGGCGACGCGCGCCGGCGCTCTCCCAC 2070114 ||| |||||| |||||||| || ||| | ||||| |||| | || ||||| || Sbjct 156873 CATAGTAGATGGTCTCAAATATC-TGCTGATTGAGCTTTTGCGCCTCCGCACTCTCGTAC 156815 Query 2070115 GGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGG 2070174 || | | |||||| | ||||| || |||| ||||| ||||||| || ||||| ||| Sbjct 156814 GGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGG 156755 Query 2070175 TGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 ||||||| ||||||| || || || |||||||||||| ||| | |||||| Sbjct 156754 TGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGAT 156702 >seq601 Length=12921292 Score = 120 bits (132), Expect = 5e-21 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || |||||||| || |||||| ||||||| | ||| |||| |||||| | Sbjct 1390090 GAGAAGCGCACGGATGACATTAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAAGGC 1390149 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 ||||| || ||| |||||||||| || ||||| || ||||| ||| || || || || Sbjct 1390150 ACCCTGTTCGAGCTGATCCTCGCAGCGAACTATCTGGACATTAAGGGTCTGCTGGACGTG 1390209 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||||||| || || ||| | ||||||||||| | || || || ||||||||||| Sbjct 1390210 ACTTGCAAGACGGTCGCGAACATGATCAAGGGCAAAACCCCGGAAGAGATCCGCAAGACG 1390269 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 1390270 TTCAACATCAAGAACG 1390285 >seq1 Length=22947322 Score = 113 bits (124), Expect = 7e-19 Identities = 205/298 (69%), Gaps = 8/298 (3%) Strand=Plus/Plus Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164 |||||||||||||| || || || || | ||||| || | || || |||||||| | Sbjct 4104207 GAGGCCGTGCTCGAGCTGAACGCATCGAATGAGCGTGGTATCGATGTGGTGCGTAGCAAG 4104266 Query 2019165 ATCAAGCATCACGCTT--CGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGAT 2019220 ||||| | | || | || |||| || ||||| | ||| || || ||| | | Sbjct 4104267 ATCAA----AATGTTTGCCCAACAGAAAGTCACGCTGCCCCGCGGGCGTCATAAGATCGT 4104322 Query 2019221 CATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCAT 2019280 || ||||| ||||| ||| || | ||| | || |||||||| || || || || Sbjct 4104323 AATTCTCGACGAGGCGGACAGCATGACGGAAGGTGCGCAGCAGGCACTACGCCGTACGAT 4104382 Query 2019281 GGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCAT 2019340 ||||| |||| ||||||||| || |||||| ||||||| |||||| | | |||| Sbjct 4104383 GGAAATCTACAGCAACACGACCCGATTTGCGTTGGCCTGTAACACGAGCGAAAAGATCAT 4104442 Query 2019341 CGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398 |||| | | ||| || || || || ||||| ||| || ||| ||||||| ||| Sbjct 4104443 CGAACCAATACAGTCACGGTGTGCGATGTTGCGTTTTTCGAAGCTCTCCGACGCACAG 4104500 >seq402 Length=2654352 Score = 111 bits (122), Expect = 2e-18 Identities = 408/629 (65%), Gaps = 28/629 (4%) Strand=Plus/Minus Query 653519 CGCATCGTCAAGCGCGACAAGTCGACCATCCTGCGCACCAACGAGGCCGCCACGGTGCAC 653578 ||| || |||||| ||| |||||| ||||||||| | ||| ||| | || | Sbjct 276613 CGCTTCACCAAGCGTGACGGGTCGACGTTCCTGCGCAACTCCGAAACCGGTATCGTCGAT 276554 Query 653579 CGCGTCGTGGTGACGCGCAACGGCGACGGCGCCAACGCGGTCAAGAT-CGTCACCCGCGC 653637 | || || |||||| |||| |||| ||| ||| |||||| ||| | | | Sbjct 276553 CAGGTGATGCTGACGCTCAACAGCGAGGGCTACAAGTTCTGCAAGATTCGTGTGC-GATC 276495 Query 653638 CATGCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACC-G 653696 ||||| || || | || ||||| | ||||||||||||| || ||||| ||| | Sbjct 276494 GGTGCGCATTCCGCAGATCGGGGACAAGTTTGCGTCGCGCCACGGACAGAAGGGTACCTG 276435 Query 653697 TGGGCAGC-GTGCGCTCGACCG-AGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCC 653754 |||| | || | || | | |||| ||||||| || | | |||| |||||| Sbjct 276434 TGGGATACAGTAC---CGGCAGGAGGACATGCCGTTTACGT---GTGAGGGCATCACGCC 276381 Query 653755 CGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGA 653814 |||||| ||||||||||||||||||| |||||||| |||||||| ||| | |||| || Sbjct 276380 GGACATCATCATCAACCCGCACGCCATTCCGTCGCGTATGACCATCGGCCATTTGATCGA 276321 Query 653815 GGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACGTGGGCGACGGCACCCCGTT--- 653871 | ||| ||| ||| ||| || | ||||| | | ||||| | || ||||| Sbjct 276320 GTGTATCCAGGGGAAGCTGGGCTCGAACAAGGGCGAGATCGGCGATGCGACACCGTTCAA 276261 Query 653872 TGGCGGCGTCACCGTNNNNNNNNNNNNNNNNNAGTTGGCCCGCCACGGGTGCGA---GCG 653928 | || |||| ||| || |||| | | | ||| Sbjct 276260 CGACGCGGTCAACGTGCAGAAAATCTCCACCTTTCTGCAGGAGTACGGCTACCATTTGCG 276201 Query 653929 CTACGGCAAGGAGGTGCTCTACCACCCGCACAC-GGGCG--AGCCCATGGAGGCGTTGAT 653985 ||||| |||||| | ||| || |||||| ||||| || || | ||| | | Sbjct 276200 ---GGGCAACGAGGTGATGTACAACGGGCACACGGGGCGTAAG---ATTAATGCGCAGGT 276147 Query 653986 CTT-TTCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCACG 654044 ||| ||||| ||| |||||||||| ||| ||| ||| |||||||||||| Sbjct 276146 CTTCCTCGGC-CCGACCTACTACCAGCGTCTGAAGCACATGGTGGACGACAAGATCCATT 276088 Query 654045 CCCGGCCGCGCGGCCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGGTCGCGCT 654104 | || |||||||||| |||||||| ||| | |||||| | ||||| || | || Sbjct 276087 CGCGTGCGCGCGGCCCGGTGCAGATTCTCGTCCGCCAGCCGATGGAGGGTCGTGCACGTG 276028 Query 654105 CGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133 || || || || |||| ||||||||| Sbjct 276027 ATGGTGGGTTGCGTTTCGGTGAGATGGAG 275999 >seq379 Length=19898295 Score = 104 bits (114), Expect = 4e-16 Identities = 145/200 (73%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442 ||||| ||||| ||| | | ||||||| |||||||||| | || || ||||| Sbjct 11685880 AGATCGATCTTCGAGTCTTCTTCGCTGGAAGACATCTTGCCGCC---GGCCAGTCCCGGA 11685824 Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGT-GGTCGCG 2411501 | || |||||| | ||| |||||||||||| |||||||| | |||||| | || || Sbjct 11685823 ATCATCGGGTTCATCAGATGGATGCGCTTGGCGTAGCCCAACTGCGGCAGATACTTCTCG 11685764 Query 2411502 CGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 2411561 || |||| || ||||| ||||| || ||||| ||||| ||||| || | || | Sbjct 11685763 -GCGAAGGTGAAAATCTTACGCTGATCTACACCGCCGAACTGTGCGTCCACCTTCAGATA 11685705 Query 2411562 CTGCTCGTCGAGGGCCTGCA 2411581 || |||||| || ||||||| Sbjct 11685704 CTCCTCGTCCAGCGCCTGCA 11685685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916111729805774