Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq712 140 2e-28
seq934 122 6e-23
seq490 122 6e-23
>seq712
Length=12093160
Score = 140 bits (154), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| ||||| |||| ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 3459581 CAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATC 3459640
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| ||||||||||| || || ||||| || |||| | |||||||||||
Sbjct 3459641 CTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTC 3459700
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || || |||||| |||| ||| ||
Sbjct 3459701 CTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATC 3459758
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||||||||| || || |||||||||||
Sbjct 3459759 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793
>seq934
Length=8401807
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| ||| |||||||| ||||| |||||||| || |||| ||||
Sbjct 268438 AGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCC 268497
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| ||||| |||||||| || ||||| || | || | |||||||||||
Sbjct 268498 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCCTCCTTGTCC 268557
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | | |||| || || |||||| |||| || ||||||
Sbjct 268558 TGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGCGTGATGGTC 268617
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| || || || || ||||||||
Sbjct 268618 TTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649
>seq490
Length=13136524
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 5732696 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5732637
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| ||| |||| | |||||||||||
Sbjct 5732636 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5732577
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 5732576 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5732517
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || ||||| || |||||||||||
Sbjct 5732516 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485
Score = 122 bits (134), Expect = 6e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|||||||| | || | ||||||| ||| | ||| ||||||||| ||||| |||||
Sbjct 5732942 TTTCCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 5732883
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| || | || | || ||||| || || |||||||||||||| || ||||| ||| ||
Sbjct 5732882 GACAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGC 5732823
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | ||||||||||| | || || || ||| | |||| || | ||||
Sbjct 5732822 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCG 5732763
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || |||||||| || || || ||||| || |||||||||||
Sbjct 5732762 ACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 5731122 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5731063
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| ||| |||| | |||||||||||
Sbjct 5731062 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5731003
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 5731002 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5730943
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || |||||||||||
Sbjct 5730942 TTGCCAGTCAACGTCTTCACGAAGATCTGCAT 5730911
Score = 116 bits (128), Expect = 2e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| ||||| || || | || | ||
Sbjct 5732468 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 5732409
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| ||| |||| | |||||||||||
Sbjct 5732408 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCC 5732349
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 5732348 TGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTC 5732289
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTG 34974
|| || || || ||||| || ||||||||
Sbjct 5732288 TTGCCAGTCAGCGTCTTCACGAAGATCTG 5732260
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| || | ||| ||||||||| || || ||||| || ||| | || ||||
Sbjct 10198980 AGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCT 10199039
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| |||||||||||||||||||| || ||||| || | || | || ||||| ||
Sbjct 10199040 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCC 10199099
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || | ||| || || | || ||||||
Sbjct 10199100 TGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCACTTCCAGCGTGATGGTC 10199159
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||| || |||||||| || ||||| ||||||||
Sbjct 10199160 TTTCCGGTCAGGGTCTTGACGAAGATTTGCATGAT 10199194
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTT-CTGAATGTTATAGTCCGA 34809
|| ||| |||||| ||| ||||| || || || | ||| | ||| ||||| || || ||
Sbjct 10201426 CCACCCTTCAACCGCAGCACCAGATGCATCGT-CGATCCGTGCTGGATGTTGTAATCGGA 10201484
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
| | || |||||||||| ||||| ||||||||||| | || || |||||| | |
Sbjct 10201485 GATAATTCGGCCATCGTCCAGCTGCTTGCCGGCGAAGATGATGCGCTGTTGGTCTGGTGC 10201544
Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929
| ||||| || | ||||| ||||| | | || ||| ||| ||||
Sbjct 10201545 AATACCCTCGCGTTCCTCGATTTTACTTTTGATATCTAGAACCGTTTCCGAGGCGGCGAC 10201604
Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | || || || ||||| || || || |||||||| |||||||||
Sbjct 10201605 GTCGAGCGTGATCGTTTTTCCGGTTAGCGTTTTTACAAAAATCTGCATG 10201653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325687774763654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |