Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq934 113 3e-20 seq712 107 1e-18 >seq934 Length=8401807 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| ||||| || ||||| || || ||||| || |||| | ||||| | Sbjct 268435 CGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCA 268494 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| ||| | |||| | ||||||||||| || || ||||| ||| Sbjct 268495 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCCTCCTTG 268554 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| |||| | ||||| || | || || ||||| || || Sbjct 268555 TCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGCGTGATG 268614 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||||| || || |||||||| Sbjct 268615 GTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 >seq712 Length=12093160 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||||||||| |||||| || || || || || ||||| || || | | ||||| | Sbjct 3459579 CGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCA 3459638 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| || | || | | |||||||||||||| |||||||| ||| Sbjct 3459639 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTG 3459698 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| | || | || || || | || || ||||| || || Sbjct 3459699 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATC 3459758 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTATGC 29800 || || || || | |||||| || || |||||||| || || ||| ||| Sbjct 3459759 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAACCGTCTGC 3459807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385213256308506