Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq391 439 2e-118 seq490 111 1e-19 seq302 111 1e-19 seq712 93.3 4e-14 >seq391 Length=2819257 Score = 439 bits (486), Expect = 2e-118 Identities = 1234/1867 (66%), Gaps = 52/1867 (3%) Strand=Plus/Minus Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633 || || || ||||||||||| |||||||| || || ||||| |||| ||||| ||| Sbjct 157492 GCGGGCTTGGTGCGCAAATAGTACATGCCAGTCTTCAGGCC-CATCTTCCACGCGTGGAA 157434 Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693 ||| || || |||| || |||| |||| ||||||||| | || ||||| || Sbjct 157433 GTGCATTGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGA 157374 Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTCATT- 146751 ||||| ||||| || |||||||| ||||||| || || |||||| | | | Sbjct 157373 CTGATCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCA--CGTTTTCACCGAAATC 157316 Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811 |||||| | ||||||||||| | || | || || ||| ||||| || || Sbjct 157315 TCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGTTCGATGTTCTGGATC 157256 Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTT--TCGTATT-TCGGGCGTGTAAAGGTTTAGTTTA 146868 || || ||||| || | || ||||| || ||| ||| | | || | | Sbjct 157255 GAACCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGT---GCGTG 157199 Query 146869 ATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928 | || || | || | | || || ||||| ||||||||||||| ||| || || | | Sbjct 157198 GTCAGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGG 157139 Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988 || || ||| ||| | ||||| || ||||| || ||||| || ||||| ||||| Sbjct 157138 TTGTAGACGTTGGACGTGTACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTC 157079 Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGT 147046 | || || ||||| ||| | || || ||| || |||| ||||| | || || | Sbjct 157078 GAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGT--GTTTGGCAATCT 157021 Query 147047 TGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACT 147106 | ||||||| || ||| | ||||| || || | ||||||||||||||||| Sbjct 157020 TTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACT 156961 Query 147107 GGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG 147166 | || | || || | ||| || || |||| ||| ||| || | | Sbjct 156960 GCAGAATACCCTTGCTCACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGG 156901 Query 147167 CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTA 147226 ||| || ||||| || || ||||| |||||||| ||||| || || || | || | Sbjct 156900 CCATCTCGCAGCTAGCTTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGA 156841 Query 147227 GGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286 | ||| || | |||||||| || | | || | | || ||||| |||| || Sbjct 156840 GCTTTTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATAC 156781 Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346 |||||| |||| ||||| || || || ||| ||||||||| || | | Sbjct 156780 CCTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCG 156721 Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406 | ||| ||| || ||||||||||| | ||| ||| || | ||| | || || Sbjct 156720 GGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTT 156661 Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAG 147466 | || ||| |||||||||| || | ||| | | | ||| | ||||| || || | Sbjct 156660 TCAGCTTCGCGAAATCATACGTACGGTCG--GGCTGG-ACGAACATGTTCAGCGCAATCG 156604 Query 147467 ACGCCAGATTGCAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGC 147521 | ||||| ||||| || ||| ||| ||||| || ||||| ||| || |||| Sbjct 156603 AGGCCAGGTTGCACACCGCCACTTCGTC-CTTCGACGA----GTACTCCACAATCTCGGT 156549 Query 147522 GCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581 ||| ||||| ||| || ||| || | ||||| || |||||||| ||||||||||| Sbjct 156548 GCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGC 156489 Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCT 147638 ||| ||| | |||||||||||| |||| ||||| || || | ||| | ||| ||||| Sbjct 156488 GTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCA 156429 Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696 ||| |||||||| ||| | || ||| |||||||||| ||||| || | | | Sbjct 156428 ---CAGATCCTGCGCCTTTACCTG--GCGGATGAAGCGGCCCTCCTTTTCATAACCCGTG 156374 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 |||||| ||| ||||| ||||| | ||||||| | |||||||| | ||||| ||| Sbjct 156373 TACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCAC 156314 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 |||| |||| | |||| ||| | ||||| |||| ||||||||||| | ||| ||| Sbjct 156313 ATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGC 156254 Query 147817 GCGTACATAAGATCGC--GCGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTCAAAT-T 147872 ||||| | | || | |||| ||| ||||| ||| |||| |||| || | Sbjct 156253 GCGTAAAACATGTCCCTTGCGC---GCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCT 156197 Query 147873 AAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACG 147932 || || | | | | ||| ||||||| || || | ||||| ||| | ||||||| || Sbjct 156196 AAAAACTC-AAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCTGGCCG 156138 Query 147933 C---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTC 147989 | || |||||||| ||||| | || || | ||||| ||||||||| ||| ||| | Sbjct 156137 CTTATTGCCGCCCTGATCGACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTAC 156078 Query 147990 CAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTG 148049 || ||| ||| | | ||||| ||| | ||| | | || || || | ||| Sbjct 156077 CAACCCGTTCGAAATTCCGTTCGTGCCAGAGATGTACGTTCCCTTCGCCCGGATGCAGTG 156018 Query 148050 CACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGT 148109 |||||| | || ||||| ||| | |||| || || ||||| | || || Sbjct 156017 CACGTTCAGCCCGATGCCACCGGCCGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTC 155958 Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 ||||||||| ||||||||||||| | | |||| ||| || || ||| || || Sbjct 155957 GTAGATGCCCTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGG 155898 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | | |||| |||||| ||| | ||| || || || ||||| | | | Sbjct 155897 ACGCTGCGTGGCCGCCGCGAACATGGTCGGCGAAGCATGGGTAAAGTAACGCTCCGAGAG 155838 Query 148230 CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289 || |||||||| || || | |||||||| |||||| ||||| | |||||||| Sbjct 155837 CAGATTGTACGTCTCGATCGCTGCCTCGATGTCCGTGCCGTGGATGCCGATGGCGACGCG 155778 Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCAT 148348 ||| ||||| ||||| || | ||| ||| |||| |||||||| | | ||| | Sbjct 155777 CATCAGCATATGCTGCGGCCTCTCGACAATCTTG-CCCTTGATCTTCAACAAATACGAAC 155719 Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 || ||||||||| | || || || ||||| | || || | |||||| || |||| Sbjct 155718 GCTCCAGGGTTTTGAAGCCGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCG 155659 Query 148409 CATCTAG 148415 || ||| Sbjct 155658 AATTTAG 155652 >seq490 Length=13136524 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || || |||||||| || |||||| |||||| ||||| || |||| Sbjct 10198998 GACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCG 10199057 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| ||||| |||||||| ||||| ||| || |||| Sbjct 10199058 AAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACG 10199117 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| || | ||||||||||| | ||| | || || || ||||| || || Sbjct 10199118 TTCTCGATAGTGTCCGATGGCTCCACTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTG 10199177 Query 132110 ATGAAAATCTGCATGA 132125 | ||| || ||||||| Sbjct 10199178 ACGAAGATTTGCATGA 10199193 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | | ||||| || || |||||||||||| || || Sbjct 5732934 ACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 5732875 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || || |||||||| |||| |||| |||||||| |||||||| || || || Sbjct 5732874 ACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCC 5732815 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | || || | |||||| || || | Sbjct 5732814 CTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAG 5732755 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || |||||||| || || | ||| |||||||| Sbjct 5732754 AGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | | ||||| || || |||||||||||| || || Sbjct 5732706 ACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 5732647 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || || ||||| || |||| |||| |||||||| |||||||| || || || Sbjct 5732646 ACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCC 5732587 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | || || | |||||| || || | Sbjct 5732586 CTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAG 5732527 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || |||||||| || || | ||| |||||||| Sbjct 5732526 AGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485 >seq302 Length=5740867 Score = 111 bits (122), Expect = 1e-19 Identities = 349/528 (66%), Gaps = 11/528 (2%) Strand=Plus/Minus Query 46461 TGGAAGGTGGAGGAGGTGGATCTGTCTAGGGACTATGACG-ACTTTGAGTCTAAATTAAA 46519 |||| ||||| |||||||| || || | |||| |||| | ||| || || | || Sbjct 73555 TGGACCGTGGAAGAGGTGGACCTCTCGAAGGAC-ATGAAGGACTGGGATTCGC--TGAAG 73499 Query 46520 CGATGACGAACGTTACTTTATCAAGCACGTGTTGGCGTTCTTTGCCGCCGCCGATAGCAT 46579 | | ||| ||| |||| ||| ||||||| |||| |||||||||||| | || | || Sbjct 73498 CCGAG-CGAGCGTCACTTCATCTCGCACGTGCTGGCCTTCTTTGCCGCCTCGGACGGTAT 73440 Query 46580 CGTGAATATTAACCTCATCGATTACATGCAGCAAAAAGTTCC-GGAATTGGAAGCGCAGT 46638 |||||| || || | || | | |||| | || | | || ||| || | | Sbjct 73439 CGTGAACGAGAATCTGGTGGAGCGCTT-CAGCCAGGAGGTGCAGGTGACGGAGGCTCGCT 73381 Query 46639 ATTTTTACAACCTTCA-AGTGCTCATCGAGTGCGTACACACTGAGATGTATAGTCTGCTC 46697 || ||| |||| | ||| || ||| ||| |||| |||||||| ||||| Sbjct 73380 GCTTCTACGGGTTTCAGATTGCG-ATGGAGAACGTGCACAGCGAGATGTACTCGCTGCTG 73322 Query 46698 ATAGAACAATTGATTAGAGACGAGCACGAGCGCGACACGTTGCTGAATGCGTTCGAGCAC 46757 || || | ||| | ||| | | ||||| || || | || ||| |||| || Sbjct 73321 ATCGACACGTACATTCGCGACCCGAAGGAGCGGGAGTACCTGTTCAACGCGATCGAA-AC 73263 Query 46758 G-TGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGC 46816 | | || ||||| || |||||| | ||||| |||| |||||| |||| || || Sbjct 73262 GCTCCCGTGCGTGAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCGAGCAAGCAGGC 73203 Query 46817 CACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAG 46876 || | | |||||| ||||||| ||||| ||||| ||| | || || || || Sbjct 73202 CAACTTTGGCGAGCGAGTGGTGGCGTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGAAG 73143 Query 46877 TTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAA 46936 || || ||||| || | | || | ||| | |||||||| ||||||||| || Sbjct 73142 CTTCGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGTCTGACGTTCTCGAA 73083 Query 46937 CGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984 ||||||||||||||| ||||| ||||| ||| || ||||| || || Sbjct 73082 CGAGTTGATCTCGCGTGACGAGGGACTGCACTGTGATTTTGCCTGCCT 73035 >seq712 Length=12093160 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||| ||| | | | ||||| || || |||||||||||| || || Sbjct 3459573 CGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 3459632 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || ||||| || |||| |||| |||||||| ||||| || || || || Sbjct 3459633 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCC 3459692 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || |||| | || | ||||| | ||||| || || | Sbjct 3459693 TCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGG 3459752 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| ||||| || || ||||| | ||| |||||||| Sbjct 3459753 GTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603657627760