Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq391 107 2e-18 >seq391 Length=2819257 Score = 107 bits (118), Expect = 2e-18 Identities = 343/528 (65%), Gaps = 8/528 (2%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| ||||| | ||| |||| || || || | || |||||||||||| ||||| Sbjct 157516 ACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCCAGTCTTC 157457 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | ||| ||| ||| | | || || || | || | ||| |||| || ||| Sbjct 157456 AGGCCCATCTTCCACGCGTGGAAGTGCATTGACGTCAGCTTGCCGTAGTTCGGTTCCGCC 157397 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 ||| | || | ||| || |||||||||| | | || ||||| || ||||| | Sbjct 157396 ACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTCGGCTGCCATCTGG 157337 Query 136819 AATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 | | || |||| | ||| |||||| | ||||| | || || || | || Sbjct 157336 AT--GCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCG 157279 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCA- 136935 | |||| ||||| ||||| | || ||||||| | |||| | || | | |||| Sbjct 157278 GTATTTGTTCGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGTTCTTCATATCAT 157219 Query 136936 -GTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 ||| | || ||| | || | | || || || || || || || ||| | Sbjct 157218 CGTCCCACAGACCGTGCGTGGTCAGA--TCCTTGATCAGGTGGTGGTTCACCACCTGAAA 157161 Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054 |||||||| || || | || ||| | || ||| ||||||||||||| ||||| Sbjct 157160 CTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCTCGAACGACTCGTT 157101 Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114 ||| |||||||| ||||| |||| || |||||||| |||| || || ||| || || Sbjct 157100 GTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCG 157041 Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAG 137162 | ||||||| ||| | | || ||| ||| ||| |||||||| Sbjct 157040 CACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAG 156993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087356381120