Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq113 145 7e-30 seq490 116 3e-21 seq934 114 1e-20 seq391 113 4e-20 seq712 104 2e-17 >seq113 Length=5901441 Score = 145 bits (160), Expect = 7e-30 Identities = 198/271 (73%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 44131 TGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCACCAATACATGCGTA 44190 |||||||||| ||||| || || |||| || | || |||||| | | |||| | Sbjct 1291638 TGTGGAACGCGGCCCAGCTGCAGATGGTGCGGGAGGCCAAGATGCACGGCTTCCTGCGCA 1291697 Query 44191 TGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCG-CGCTCGTTCAT 44249 |||| ||| ||||||||| |||||||| || | | || | | | |||||| Sbjct 1291698 TGTACTGGGCGAAGAAGATACTGGAGTGGACGCGA-ACGCCCGAGGAGGCGCTCGAGACG 1291756 Query 44250 GCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAGGA 44309 |||||||| |||||||| |||||| ||||||| |||||||| ||||||||||| || Sbjct 1291757 GCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGACCCGAACGGGTACGTCGGT 1291816 Query 44310 TGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCTACCCATCTACGG 44368 || |||||||| || || ||||||| |||||| ||| |||| ||| | ||| Sbjct 1291817 TGCATGTGGTCGATCGCGGGCATCCACGACCAGGGC-TGGAAGGAGCGCGACATATTCGG 1291875 Query 44369 CAAAGTGCGCTACATGAACTACAACGGTTGC 44399 |||| | ||||||||||||||| |||| ||| Sbjct 1291876 CAAAATTCGCTACATGAACTACGACGGCTGC 1291906 >seq490 Length=13136524 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || |||||||| |||| || || || |||| ||| Sbjct 5731119 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5731060 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || |||| |||||||| || | || | | |||||||||| | Sbjct 5731059 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5731000 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | |||||| || || ||||||| ||||| || || Sbjct 5730999 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5730940 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || ||||| || ||||| || |||||||| || Sbjct 5730939 CCAGTCAACGTCTTCACGAAGATCTGCATCCT 5730908 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || |||||||| |||| || || || |||| ||| Sbjct 5732693 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732634 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || |||| |||||||| || | || | | |||||||||| | Sbjct 5732633 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732574 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | |||||| || || ||||||| ||||| || || Sbjct 5732573 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732514 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || ||||| || |||||||| Sbjct 5732513 CCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || |||||||| |||| || || || |||| ||| Sbjct 5732465 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 5732406 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || |||| |||||||| || | || | | |||||||||| | Sbjct 5732405 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 5732346 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | |||||| || || ||||||| ||||| || || Sbjct 5732345 ATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTG 5732286 Query 35708 CCCGTCAAAGTTTTCACAAATATCTG 35733 || |||| || ||||| || ||||| Sbjct 5732285 CCAGTCAGCGTCTTCACGAAGATCTG 5732260 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568 |||||| || | | | ||||| ||| | || |||||| || || ||||| || | Sbjct 10198964 TCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGA 10199023 Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 || ||| || | || ||||||||||| || || || |||| |||||||| |||| ||| Sbjct 10199024 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 10199083 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT---TC 35685 | || ||||| ||| ||||| ||||| | | | ||||| |||| || Sbjct 10199084 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTC---CGATGGCTC 10199140 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| |||| |||||| || || || |||| || || || || || ||||| Sbjct 10199141 CACTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191 >seq934 Length=8401807 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || |||||||| | | | |||||| || | || ||||| || |||||||| || Sbjct 268420 TTACCACCACGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCC 268479 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || || || | || ||||||||||| || ||||| |||| |||||||| |||| Sbjct 268480 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGG 268539 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 || | | |||||||||| |||||| ||||| | || | | |||||| | || Sbjct 268540 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCG 268599 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 ||||| | |||||| || || || || | |||||||| || |||||||| || Sbjct 268600 ACCTCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATCCT 268652 >seq391 Length=2819257 Score = 113 bits (124), Expect = 4e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 41187 GATCAGCTGCGCGACACGATCACCCTTCATCACCACAAAGTCCACGTCGTTGTTGTTCAC 41246 ||| | |||||||| ||||||||||||| ||||| |||||||| | ||| || ||| | Sbjct 1161904 GATGAACTGCGCGATACGATCACCCTTCTTCACCTCAAAGTCCGCCTCGGAGTGGTTGAA 1161963 Query 41247 CATCACTATGCCCACGTTGCCCGTGTAGTCGGGATCGATGACGCCAGCAGCAATGTCGAT 41306 || ||| | ||| || || || |||||| |||| |||||| ||| | | ||||| Sbjct 1161964 CAGCACGACGCCGACATTTCCACGGTAGTCCTCGTCGACGACGCCGGCACCCACATCGAT 1162023 Query 41307 CTTGTGCTTCAACGCCAGCCCCGATCGGGGCGCGATCCTACCGTAACAATCTTTGGGCAG 41366 || ||||| ||||||||| ||||| || || | | |||||||| ||| |||| Sbjct 1162024 GAAGTTCTTCACCGCCAGCCCGGATCGTGGTGCCACACGTCCGTAACAGCCTTCCGGCAC 1162083 Query 41367 CTGCA 41371 ||||| Sbjct 1162084 CTGCA 1162088 >seq712 Length=12093160 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | | || ||||| ||| | || |||||| || |||||||| |||| | Sbjct 3459567 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3459626 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || ||||||||||| || || || || | |||||||| |||| || Sbjct 3459627 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 3459686 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||||| | | | | ||| || | || ||| Sbjct 3459687 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 3459746 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || ||||| |||||||| | ||||| || || |||||||| Sbjct 3459747 TCAAGGGTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450786466191280