Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq391 197 1e-45 seq934 113 5e-20 seq490 105 7e-18 seq712 95.1 1e-14 seq302 95.1 1e-14 >seq391 Length=2819257 Score = 197 bits (218), Expect = 1e-45 Identities = 890/1393 (64%), Gaps = 38/1393 (3%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || |||||| ||||||| || | ||||| |||||| ||||| || || || | Sbjct 155763 CAGCATATGCTGATGCGCGTCGCCATCGGCATCCACGGCACGGACATCGAGGCAGCGATC 155822 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | || | || | | ||||| || |||||||| |||||||| || Sbjct 155823 GAGACGTACAATCTGCTCTCGGAGCGTTACTTTACCCATGCTTCGCCGACCATGTTCGCG 155882 Query 7684 GCGGGCACAAACGCG-CCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 |||| ||| | ||| || || |||| || || ||| |||| |||||| ||| ||||| Sbjct 155883 GCGGCCACGCA-GCGTCCCCAGCTGTCGTCTTGCTTTCTGCTGACCATGTCCGACGACAG 155941 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802 |||||| ||||| ||| |||||||| | ||||| || ||||| | | ||| || Sbjct 155942 CATCGAGGGCATCTACGACACGCTGAAGCAGTGCGCACTGATCTCCAAGTCGGCCGGTGG 156001 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || || |||||||| || | | || || || || | |||| ||| ||||| Sbjct 156002 CATCGGGCTGAACGTGCACTGCATCCGGGCGAAGGGAACGTACATCTCTGGCACGAACGG 156061 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 || | | ||| || | || ||| ||||||||| ||| || ||| || | || || Sbjct 156062 AATTTCGAACGGGTTGGTACCGATGCTGCGCGTGTACAACAATACGGCACGGTACGTCGA 156121 Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGA 7979 ||||| || ||||| ||| || ||||||||| ||||||||||||||| || Sbjct 156122 TCAGGGCGGCAATAAGCGGCCAGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGA 156181 Query 7980 CATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGC--GC 8037 | | | | || ||||| |||| || || | || |||| | Sbjct 156182 TGTGTTTGAGTTTTTAGATCTGAAGAAAAACACCGGCAAGGAGG--AGGTGCGCGCAAGG 156239 Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097 || | || | || | ||| | || |||||||| ||| |||||| | ||| | Sbjct 156240 GACATGTTTTACGCGCTCTGGATACCGGATCTGTTCATGCAGCGCGTGGAGGCGAACGAA 156299 Query 8098 CAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157 ||| | |||||||| | || || ||| | | || | | Sbjct 156300 ACGTGGAGTTTGATGTGCCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAG 156359 Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217 || || | ||||||| || ||| | || ||| | | | || || || || ||| Sbjct 156360 TTCGAGAAGTTGTACACGGGTTATGAAAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCG 156419 Query 8218 CGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTG 8277 | || ||| || || ||||||| || || || || | |||||||||||| Sbjct 156420 CAGGATCTGTGGTTTGCGATCATCGAATCCCAGGTGGAGACGGGCGTACCGTACATGCTG 156479 Query 8278 TACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGC 8337 ||||| ||||| ||||| ||||||||| ||| ||| | |||||||| ||| Sbjct 156480 TACAAGGACGCGTGCAATCGCAAAAGCAACCAACAAAACATCGGCACCATCAAGTGCTCT 156539 Query 8338 AATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTA 8397 || || ||| | || ||||| ||||| || ||||||||||| || ||||| || Sbjct 156540 AACCTTTGCACCGAGATTGTGGAGTACTCGTCGAAGGACGAAGTGGCGGTGTGCAACCTG 156599 Query 8398 GCGTCGGTGTGTTTAAACGCGTTCGT--TGATCGACGCTCAAACACTTACGACTTTGAAC 8455 || ||| | | ||| |||||| | |||| | || || || || | Sbjct 156600 GCCTCGATTGCGCTGAACATGTTCGTCCAGCCCGACCGT-----ACGTATGATTTCGCGA 156654 Query 8456 AATTGAAAAACGCCGTGCAA---GTGACGGTACGCAATTTAGATCGCATCATTGATGTCA 8512 | ||||| | | | || |||||| ||||| || | || || || || | Sbjct 156655 AGCTGAAAGAGGTAGCCAAAATCGTGACG---CGCAACTTGAACAAGATTATCGACGTGA 156711 Query 8513 ATTTTTATCCCTTGGAAGAAGCG-CGCGTATCGAACATGCGCCACAGACCCGTTGGCGTG 8571 | || || || || |||||| ||| ||||||||||||||| | || | || | Sbjct 156712 ACTTCTACCCGGTGCCGGAAGCGAAGCG-CTCGAACATGCGCCACCGTCCGATCGGTATC 156770 Query 8572 GGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAA 8631 ||||| || ||| |||| || ||||| | || || || |||| ||||| || || Sbjct 156771 GGCGTCCAGGGTATGGCTGATGCGTTCATCTTGATGGGCTTCCCGTACGAGAGTGCGGAG 156830 Query 8632 GCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGC 8691 |||| | |||||| | ||| || || | || || || || | ||||| ||| Sbjct 156831 GCGCAAAAGCTCAATCAGCAGATATTTGAGACCATCTACTATGGTGCGCTGGAAGCTAGC 156890 Query 8692 TGTCAACTTGCCCG---AGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGC 8748 || | | || ||| || | ||| ||||||| |||||| || || | ||| Sbjct 156891 TG-CGAGATGGCCGCTCAGGA--GGGACCGTACGAGACGTACGAAGGATCTCCGGTGAGC 156947 Query 8749 CGCGGAATATTGCAATACGACATGTGGAATGTCACG---CCCACCTCTTTGTGGAATTGG 8805 || || |||| |||||||||||||| || | || || ||||||||||| Sbjct 156948 AAGGGTATTCTGCAGTACGACATGTGGAA---CAAGGTACCGACGGACCTGTGGAATTGG 157004 Query 8806 AGCGA-TTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTA 8864 |||| |||| || ||||| || |||| ||||||| || ||| || | || Sbjct 157005 -GCGACGCTGAAGGAAAAGATTGCCAAACACGGTGTGCGCAACTCACTGCTGCTCGCGCC 157063 Query 8865 CATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCAC 8924 ||||| || || |||| || ||||| |||| |||||||| || || ||||||| ||| Sbjct 157064 GATGCCGACGGCTTCGACGGCACAAATTTTGGGCAACAACGAGTCGTTCGAGCCGTACAC 157123 Query 8925 CAACAACGTGTAC 8937 |||||| ||| Sbjct 157124 GTCCAACGTCTAC 157136 >seq934 Length=8401807 Score = 113 bits (124), Expect = 5e-20 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 134483 cTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | |||||| | ||| | ||| || || |||||||| || ||||||||||| Sbjct 268419 CTTACCACCACGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTC 268478 Query 134543 GCCAACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 | || | ||| | || || ||||| ||||| ||||| |||| |||||||||||| Sbjct 268479 --CGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCC 268536 Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660 || || || || || || || || || || || || || | ||||| || | Sbjct 268537 GGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGC 268596 Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| || ||||| | ||||| |||||||| ||||| Sbjct 268597 TCGACCTCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 >seq490 Length=13136524 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| |||| || || | ||| || || || ||||| ||||| || || |||||||| Sbjct 10198964 TCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGA 10199023 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| | || || ||||| || || || || |||| |||||||||||| || || Sbjct 10199024 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 10199083 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || || ||||| || || || || | ||||| || | ||||| Sbjct 10199084 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCAC 10199143 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || || ||||| |||||||| Sbjct 10199144 TTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | || || | || | ||| | || || ||||| || |||||||||||| Sbjct 5732942 TTTCCTCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCG 5732883 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || | ||| || ||||||||||| || || |||| |||||||||||| ||| Sbjct 5732882 GACAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGC 5732823 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || || || || || || | ||||| |||| || Sbjct 5732822 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCG 5732763 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || || || | || || ||||| || ||||| Sbjct 5732762 ACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| || |||||||||||| | || | ||| || ||||| ||||| Sbjct 5731107 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 5731048 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || |||| |||||||||||| ||||| || || || || || || || || || Sbjct 5731047 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5730988 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| |||| || || || ||||| ||||| || || || || || Sbjct 5730987 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAACGTC 5730928 Query 134697 TTAACGAAAATTTGCAT 134713 || ||||| || ||||| Sbjct 5730927 TTCACGAAGATCTGCAT 5730911 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| || |||||||||||| | || | ||| || ||||| ||||| Sbjct 5732681 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 5732622 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || |||| |||||||||||| ||||| || || || || || || || || || Sbjct 5732621 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5732562 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| |||| || || || ||||| ||||| || || || | || Sbjct 5732561 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 5732502 Query 134697 TTAACGAAAATTTGCAT 134713 || ||||| || ||||| Sbjct 5732501 TTCACGAAGATCTGCAT 5732485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| || |||||||||||| | || | ||| || ||||| ||||| Sbjct 5732453 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCG 5732394 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || |||| |||||||||||| ||||| || || || || || || || || || Sbjct 5732393 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 5732334 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| |||| || || || ||||| ||||| || || || | || Sbjct 5732333 ACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTC 5732274 Query 134697 TTAACGAAAATTTG 134710 || ||||| || || Sbjct 5732273 TTCACGAAGATCTG 5732260 >seq712 Length=12093160 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| || || || || || ||||| || |||||||||||| | ||| | Sbjct 3459576 AGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 3459635 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || || | |||||||||||| ||||| || || || Sbjct 3459636 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCC 3459695 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | || || || | || || || || ||| Sbjct 3459696 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 3459755 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| || | ||||| ||||| || ||||| ||| Sbjct 3459756 ATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 3459797 >seq302 Length=5740867 Score = 95.1 bits (104), Expect = 1e-14 Identities = 240/357 (67%), Gaps = 16/357 (4%) Strand=Plus/Plus Query 21528 CAATTCCACGCA-CAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAAT 21586 ||| |||| ||| ||| ||||| |||||||| || ||||| || |||| ||||| | Sbjct 72854 CAACTCCA-GCAGCAACCGATCGGCCACGAACTCGATGTACTGCGACATCAGATCGCAGT 72912 Query 21587 TCATGCCCAACAGATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCG 21646 |||| || | || ||| ||||| ||||| | || | ||||||| |||||| || |||| Sbjct 72913 TCATACCGAGCATATCAACCGGGAGCGCCTTCGTCAGGAACTCCTGCTCGATTGCGACCG 72972 Query 21647 CTTCCTTGATCATGGCGTGTATTTCACCGGCGGACAAT--TTGTCTTGAGGCTCGATGTA 21704 | || ||| || | |||| ||| | | | | ||| | | | | || Sbjct 72973 CATCGCGGATGATTTCCG-----TCAC--GCGCTCCTTCGTCGGCTTCTG-CACCAGATA 73024 Query 21705 TTTGTTGTAGTAGAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTC 21764 | | | || || ||||||| ||||| ||||||||| ||||| ||||| || Sbjct 73025 ---GCGGAACATCAGGCAGGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTC 73081 Query 21765 GTTGCTGAACGTGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAA 21824 ||| |||||| ||||| ||||| | || || || || | | || || ||||| || Sbjct 73082 GTTCGAGAACGTCAGACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAA 73141 Query 21825 GCTACCGGaaaaaaaCACGCCCTCCACAATGGCGAACGCCACCATGCGCCGCGCCAA 21881 ||| || || || | |||||| || ||||||||||||| || | |||||| Sbjct 73142 GCTTCCACTGAAGAAGATGCCCTCGACGGCAGCGAACGCCACCACTCG-CTCGCCAA 73197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505390402070320