Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq391 208 1e-48 seq302 109 8e-19 >seq391 Length=2819257 Score = 208 bits (230), Expect = 1e-48 Identities = 869/1361 (64%), Gaps = 19/1361 (1%) Strand=Plus/Minus Query 68880 CCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939 ||||| ||| || || | ||||| ||||| | ||||| || ||||| || || || Sbjct 157004 CCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATACCCTTGCT 156945 Query 68940 TGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGC 68999 | ||||| | || || || || ||||| ||||| | || | || || || || Sbjct 156944 CACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCGCAGCTAGC 156885 Query 69000 CTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 69059 || | ||||| || || || || || || |||| || |||||| | ||| || || Sbjct 156884 TTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGCGCCTCCGC 156825 Query 69060 ACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 ||| ||| | || | | | || || ||||| |||| ||||| || || ||||| Sbjct 156824 ACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACC 156765 Query 69120 GATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATC 69179 ||| || | || | | | || || | | ||||| || | || || | || | || Sbjct 156764 GATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTC 156705 Query 69180 TATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC 69239 ||||| || || | || || || | ||| | || || || || || ||||| Sbjct 156704 GATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATC 156645 Query 69240 AAATC----GTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTG 69295 | | ||| || | | ||||| ||||| || | || || || || || || | Sbjct 156644 ATACGTACGGTCGGGCTGGA-CGAACATGTTCAGCGCAATCGAGGCCAGGTTGCACACCG 156586 Query 69296 CTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGA 69352 | || || | | || | || | | ||||| || || || ||| || |||| Sbjct 156585 CCACTTCGTCCTTCGAC---GAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGA 156529 Query 69353 TAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACG 69412 | || || | ||||| || || || || || || ||||||||||| || || ||| Sbjct 156528 TGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 156469 Query 69413 GAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT-AGCATTTA-- 69469 | || || || | ||| |||||||| || | ||| | || ||| || |||| Sbjct 156468 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA-GATCCTGCGCCTTTACC 156410 Query 69470 TTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTC 69529 | ||| || | || ||| |||||||| || || | | ||||| || || | Sbjct 156409 TGGCGG--ATGAAGCGGCCCTCCTTTTCATAACCCGTGTACAACTTCTCGAACTCTTCGC 156352 Query 69530 CCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCAT 69589 |||| ||| ||||||| ||||| || | || |||||||| |||| || | Sbjct 156351 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCG 156292 Query 69590 CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTC 69649 ||| || || | ||| || ||||| || ||||| || || ||| | || || | | Sbjct 156291 CCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTCCCTTGCGC 156232 Query 69650 TATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCC 69709 || || || || || ||||| || ||||| | |||||| | | ||| |||| Sbjct 156231 GCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATCGCCGTGCC 156172 Query 69710 ATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATC 69769 | || || || || || || | | || || || ||||| || |||||||| | ||| | Sbjct 156171 ACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATCGACGTACC 156112 Query 69770 TGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTC 69829 || || || || || || | ||||||||| | | || || || | || || || | Sbjct 156111 GTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCCGTTCGTGC 156052 Query 69830 CAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCC 69888 |||| || || |||| | || || || | | | | || || || || || ||| Sbjct 156051 CAGAGATGTACGTTCCCTTCGCCCGGAT-GCAGTGCACGTTCAGCCCGATGCCACCGGCC 155993 Query 69889 ATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948 || ||||| || || || | |||| ||||| || || ||||| ||||| || || Sbjct 155992 GACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCG 155933 Query 69949 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAAT 70008 |||| | || ||||| || |||| || || | || |||| || | Sbjct 155932 GACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTGGCCGCCGCGAACATG 155873 Query 70009 GTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGAT 70068 || || || || || || || | || || ||||||||||| || || || |||| Sbjct 155872 GTCGGCGAAGCATGGGTAAAGTAACGCTCCGAGAGCAGATTGTACGTCTCGATCGCTGCC 155813 Query 70069 TCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCT 70128 || || ||| || || || || ||||| ||||||| ||||||||| || | || Sbjct 155812 TCGATGTCCGTGCCGTGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCG 155753 Query 70129 ACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAG 70188 || | || || || ||||||| || || ||||| ||||| || || |||||| Sbjct 155752 ACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTTGAAGCCGAAATAG 155693 Query 70189 TTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 ||||| ||||| | |||||||||||| | |||||||| Sbjct 155692 TTGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 155652 >seq302 Length=5740867 Score = 109 bits (120), Expect = 8e-19 Identities = 288/439 (66%), Gaps = 3/439 (1%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 ||||| | |||||| || ||||| || || ||||| || | || || ||||| || Sbjct 73029 AACATCAGGCAGGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAG 73088 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || || ||||| || |||||||| || ||||| || ||||| || || |||| Sbjct 73089 AACGTCAGACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCA 73148 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 ||||||||||| || || || || || || || | || ||| || | | | | Sbjct 73149 CTGAAGAAGATGCCCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGC 73208 Query 39788 T---TATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 | | ||||| ||| | ||||| || || |||||||| || || || | ||||| Sbjct 73209 TTGCTCGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCG 73268 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || || || || || || | || | || || || || || || | ||| Sbjct 73269 ATCGCGTTGAACAGGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCAGC 73328 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 ||||| || || | ||| || ||||| |||||||| ||||| || || | || Sbjct 73329 GAGTACATCTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCC 73388 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 || || | || ||||| | || | ||| ||| ||| || ||||| || || || Sbjct 73389 TCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTCC 73448 Query 40025 CTAGCGGCAAAAAATGCCA 40043 |||||||| || |||| Sbjct 73449 GAGGCGGCAAAGAAGGCCA 73467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686897929668240