Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1145 116 3e-21 >seq1145 Length=65916 Score = 116 bits (128), Expect = 3e-21 Identities = 273/407 (67%), Gaps = 14/407 (3%) Strand=Plus/Minus Query 19542 AAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC 19601 |||| |||||| ||||| ||| | |||||| | || ||||| || || | || | Sbjct 24536 AAGTGGTTTGCATATTATTATATTTGATGAAATCGATGCAATTTGCAAAGCTCGTGGCAC 24477 Query 19602 TG---GTGTAAAT---GGAGTACATGACACTGTTGTCAATCAACTCCT-GTCAAAATTAG 19654 || ||| ||| || || ||||| ||||||||||| ||||| || | ||||||| | Sbjct 24476 TGTTGGTGGCAATTCAGGTGTTCATGATACTGTTGTCAACCAACTGCTAGCCAAAATT-G 24418 Query 19655 ACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAA 19714 | |||||| | || |||| || ||||| || ||||| ||||| ||| | ||| | | Sbjct 24417 ATGGTGTTGAGCAGTTGAACAACATTTTGGTAATTGGAATGACAAATCGCAGGGACATGA 24358 Query 19715 TAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCG 19774 ||||| ||| | |||| |||||||| ||||| | | || || || | | | || Sbjct 24357 TAGACGAAGCCCTGCTACGTCCCGGTCGCCTGGAAGTTCAAATGGAGATCAGCCTGCCGA 24298 Query 19775 ATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAA---AATA 19831 | ||| || || ||| | ||||| ||||| ||||| | |||| | || || | Sbjct 24297 ACGAAGAGGGTCGCGTGCAGATTTTGAACATCCATACCAGACGCATGAAAGAATTCAAAA 24238 Query 19832 ACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCG 19891 | | || ||||||||| || ||| ||| | || ||||| || |||| Sbjct 24237 AAC---TAGCCCCAGATGTAGATTTACGTGAACTTGGTGTTATGACGAAAAATTACAGCG 24181 Query 19892 GCGCAGAACTTGAGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 | || ||| | || || || ||| | || || ||||| | ||||||| Sbjct 24180 GTGCGGAATTAGAAGGTTTGGTGCGCGCAGCACAATCGACTGCAATG 24134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449867502330