Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq391 244 9e-60 seq712 107 2e-18 seq490 104 2e-17 >seq391 Length=2819257 Score = 244 bits (270), Expect = 9e-60 Identities = 1058/1647 (64%), Gaps = 47/1647 (3%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || ||||| ||||| || || ||||| ||| ||||||||||||||||| |||||||| Sbjct 157522 TTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCCA 157463 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGA--TGC-TGCACATT-GTTTG--GTAA 130519 || || || || || || ||| ||||| ||| | || | | ||| ||| Sbjct 157462 GTCTTCAGGCCCATCTT----CCACGC--GTGGAAGTGCATTGACGTCAGCTTGCCGTAG 157409 Query 130520 TTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579 || |||| ||||||| ||||||| ||| ||||| ||||| || || || |||| ||| Sbjct 157408 TTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTCG 157349 Query 130580 GCAGCCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638 || ||||| | || ||| | ||| | ||||||||| | || ||||| ||||| | Sbjct 157348 GCTGCCATCTGGATGCACGTTTTCACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCG 157290 Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698 | | || ||||| | | || || | |||||||| ||| | ||| ||| Sbjct 157289 CACTTCCTTCGGTATTTGTTCGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGTT 157230 Query 130699 GCGCATACTTTTATCGT---ACAATCCAAGC-TGTACAAGATCTTTTACCAAATGATTAT 130754 |||| | ||||| ||| || || || || |||| || | || || | | Sbjct 157229 CTTCATA---TCATCGTCCCACAGACCGTGCGTGGTCA-GATCCTTGATCAGGTGGTGGT 157174 Query 130755 TAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTT 130814 | | | ||||| || || | ||| ||||| | ||| | |||| |||| |||| | Sbjct 157173 TCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCT 157114 Query 130815 CAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTA 130874 | || || ||||||||||| || |||||||| || | || || ||||| || | | Sbjct 157113 CGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCA 157054 Query 130875 ATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA 130934 || || || || | |||||| | | || ||| ||||| |||||| ||| | Sbjct 157053 GCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACA 156994 Query 130935 GAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGAC 130994 | || ||| || ||||||||||| || | || || || || || || | ||| Sbjct 156993 GGTCCGTCGGT---ACCTTGTTCCACATGTCGTACTGCAGAATACCCTTGCTCACCGGAG 156937 Query 130995 TGGATTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAG 131054 |||| ||| ||||| ||| || | |||| ||| ||||||||||| | Sbjct 156936 ATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCGCAGCTAGCTTCCAGCG 156877 Query 131055 CTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGT 131114 | || || || ||||| || || || | ||| | | || ||| | ||||||| Sbjct 156876 CACCATAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGCGCCTCCGCACTCTCGT 156817 Query 131115 AAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTC 131174 | || || ||| || || || || || || | |||||| | || | || | ||| | Sbjct 156816 ACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGAC 156757 Query 131175 TATGTTTTAAATTACATTTACGCGAACATTCGG--TGGGATAAAGGTTAATGTCAATTAT 131232 || | || | || | | ||| || || | ||| | ||| || || Sbjct 156756 GGTGGCGCATGTTCGAGCGCTTCG--CTTCCGGCACCGGGTAGAAGTTCACGTCGATAAT 156699 Query 131233 TTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGT 131292 ||||| || |||||| || |||| | || ||||| || |||||||| |||| Sbjct 156698 CTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGT 156639 Query 131293 GCCAGTTTCGAGGTTTAC-AAATTGATTTACACATATTGACGCCAGATTACAAACTGCCG 131351 | ||| | | || || || | | || || || ||||| || || || ||| Sbjct 156638 ---ACGGTCGGGCTGGACGAACATGTTCAGCGCA-ATCGAGGCCAGGTTGCACACCGCCA 156583 Query 131352 TTTCGTCATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGT 131409 |||||| | ||| | |||| ||||| |||| ||| | ||| || ||| ||||| Sbjct 156582 CTTCGTCCT--TCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGGT 156525 Query 131410 GCCCAAATTTTGTTGATTGCTTTTAGCATT-CACATGGTCCTTGTACATCATGTAGGGCG 131468 ||| | |||||||| |||||||| ||| ||| ||||||||||| |||||| || Sbjct 156524 GCCGATGTTTTGTTGGTTGCTTTTGCGATTGCAC-GCGTCCTTGTACAGCATGTACGGTA 156466 Query 131469 TGCCCGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTG 131526 |||||| || || || | ||| || | | | || | || | | || | || Sbjct 156465 CGCCCGTCTCCACCTGGGATTCGATGA--TCGCAAACCACAGATCCTGCGCCTTTACCTG 156408 Query 131527 ATATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAA 131586 || | |||| ||||| ||| ||||||| | || || | || ||| | Sbjct 156407 GCGGATGAAGCGGCCCTCCTTTTCATAACCCGTGTACAACTTCTCGAACTCTTCGCCCCA 156348 Query 131587 CGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTC 131646 |||| | |||| |||||| ||| || ||||| | |||| ||||| || Sbjct 156347 CGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCTC 156288 Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706 || |||| ||| |||| |||||| | ||| | |||||| |||| || || || Sbjct 156287 CACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTCCCTTGCGCGCAC 156228 Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766 ||| || | || | |||| |||| || |||||| || || | || | ||||| || Sbjct 156227 CTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATCGCCGTGCCACGG 156168 Query 131767 TTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAAC 131823 |||| || | || | || ||| |||||| ||||| |||| || | || | Sbjct 156167 CTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATCGACGTACCGTGC 156108 Query 131824 CATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTT 131883 | | |||||||| ||||||| ||| || |||| ||||| | |||| || |||| Sbjct 156107 CGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCCGTTCGTGCCAGA 156048 Query 131884 AATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTT 131943 ||||| | || || || | ||| ||| ||||| || || || || ||| | | || Sbjct 156047 GATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCCGACTT 155988 Query 131944 AGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAAT 132003 ||||| |||||||| | | || |||| ||||| || || | |||||| ||| || Sbjct 155987 GGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCGGACAT 155928 Query 132004 GTCGACTAAAAAGCAAGAGGACAACTG 132030 | | | ||||||||| |||| ||| Sbjct 155927 GGTCAGCAGAAAGCAAGACGACAGCTG 155901 >seq712 Length=12093160 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| |||| |||| ||| | || || || || || || ||||||||| | Sbjct 3459567 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3459626 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| || |||||| | ||||||||||| ||||||||||| Sbjct 3459627 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 3459686 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| |||| | || | || || | || || || Sbjct 3459687 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 3459746 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||| || ||||| || ||||| ||||| Sbjct 3459747 TCAAGGGTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793 >seq490 Length=13136524 Score = 104 bits (114), Expect = 2e-17 Identities = 173/246 (70%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||| ||| | || || || || || ||||||||||| | Sbjct 10198965 CCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGAC 10199024 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| ||||| || |||||| | || |||||||| |||||||| || Sbjct 10199025 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 10199084 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | || || ||||| ||||| |||| | | || | |||||| | |||| || || Sbjct 10199085 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGC-TCCAC 10199143 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT-----AGCTGCT 27254 ||| || || || | || || ||||| || || || ||||||||||| ||||| | Sbjct 10199144 TTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATGATTAAGCTG-T 10199202 Query 27255 AAAAAT 27260 |||||| Sbjct 10199203 AAAAAT 10199208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424927843527792