Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq391 244 9e-60
seq712 107 2e-18
seq490 104 2e-17
>seq391
Length=2819257
Score = 244 bits (270), Expect = 9e-60
Identities = 1058/1647 (64%), Gaps = 47/1647 (3%)
Strand=Plus/Minus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| ||||| ||||| || || ||||| ||| ||||||||||||||||| ||||||||
Sbjct 157522 TTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTGGTGCGCAAATAGTACATGCCA 157463
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGA--TGC-TGCACATT-GTTTG--GTAA 130519
|| || || || || || ||| ||||| ||| | || | | ||| |||
Sbjct 157462 GTCTTCAGGCCCATCTT----CCACGC--GTGGAAGTGCATTGACGTCAGCTTGCCGTAG 157409
Query 130520 TTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579
|| |||| ||||||| ||||||| ||| ||||| ||||| || || || |||| |||
Sbjct 157408 TTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGATCGATGAACGCACCCCGGTCG 157349
Query 130580 GCAGCCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638
|| ||||| | || ||| | ||| | ||||||||| | || ||||| ||||| |
Sbjct 157348 GCTGCCATCTGGATGCACGTTTTCACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCG 157290
Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698
| | || ||||| | | || || | |||||||| ||| | ||| |||
Sbjct 157289 CACTTCCTTCGGTATTTGTTCGATGTTCTGGATCGAACCGTTGTGGGCCAGGATTGTGTT 157230
Query 130699 GCGCATACTTTTATCGT---ACAATCCAAGC-TGTACAAGATCTTTTACCAAATGATTAT 130754
|||| | ||||| ||| || || || || |||| || | || || | |
Sbjct 157229 CTTCATA---TCATCGTCCCACAGACCGTGCGTGGTCA-GATCCTTGATCAGGTGGTGGT 157174
Query 130755 TAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTT 130814
| | | ||||| || || | ||| ||||| | ||| | |||| |||| |||| |
Sbjct 157173 TCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAGACGTTGGACGTGTACGGCT 157114
Query 130815 CAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTA 130874
| || || ||||||||||| || |||||||| || | || || ||||| || | |
Sbjct 157113 CGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCA 157054
Query 130875 ATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA 130934
|| || || || | |||||| | | || ||| ||||| |||||| ||| |
Sbjct 157053 GCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACA 156994
Query 130935 GAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGAC 130994
| || ||| || ||||||||||| || | || || || || || || | |||
Sbjct 156993 GGTCCGTCGGT---ACCTTGTTCCACATGTCGTACTGCAGAATACCCTTGCTCACCGGAG 156937
Query 130995 TGGATTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAG 131054
|||| ||| ||||| ||| || | |||| ||| ||||||||||| |
Sbjct 156936 ATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCGCAGCTAGCTTCCAGCG 156877
Query 131055 CTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGT 131114
| || || || ||||| || || || | ||| | | || ||| | |||||||
Sbjct 156876 CACCATAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGCGCCTCCGCACTCTCGT 156817
Query 131115 AAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTC 131174
| || || ||| || || || || || || | |||||| | || | || | ||| |
Sbjct 156816 ACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGAC 156757
Query 131175 TATGTTTTAAATTACATTTACGCGAACATTCGG--TGGGATAAAGGTTAATGTCAATTAT 131232
|| | || | || | | ||| || || | ||| | ||| || ||
Sbjct 156756 GGTGGCGCATGTTCGAGCGCTTCG--CTTCCGGCACCGGGTAGAAGTTCACGTCGATAAT 156699
Query 131233 TTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGT 131292
||||| || |||||| || |||| | || ||||| || |||||||| ||||
Sbjct 156698 CTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGT 156639
Query 131293 GCCAGTTTCGAGGTTTAC-AAATTGATTTACACATATTGACGCCAGATTACAAACTGCCG 131351
| ||| | | || || || | | || || || ||||| || || || |||
Sbjct 156638 ---ACGGTCGGGCTGGACGAACATGTTCAGCGCA-ATCGAGGCCAGGTTGCACACCGCCA 156583
Query 131352 TTTCGTCATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGT 131409
|||||| | ||| | |||| ||||| |||| ||| | ||| || ||| |||||
Sbjct 156582 CTTCGTCCT--TCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGGT 156525
Query 131410 GCCCAAATTTTGTTGATTGCTTTTAGCATT-CACATGGTCCTTGTACATCATGTAGGGCG 131468
||| | |||||||| |||||||| ||| ||| ||||||||||| |||||| ||
Sbjct 156524 GCCGATGTTTTGTTGGTTGCTTTTGCGATTGCAC-GCGTCCTTGTACAGCATGTACGGTA 156466
Query 131469 TGCCCGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTG 131526
|||||| || || || | ||| || | | | || | || | | || | ||
Sbjct 156465 CGCCCGTCTCCACCTGGGATTCGATGA--TCGCAAACCACAGATCCTGCGCCTTTACCTG 156408
Query 131527 ATATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAA 131586
|| | |||| ||||| ||| ||||||| | || || | || ||| |
Sbjct 156407 GCGGATGAAGCGGCCCTCCTTTTCATAACCCGTGTACAACTTCTCGAACTCTTCGCCCCA 156348
Query 131587 CGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTC 131646
|||| | |||| |||||| ||| || ||||| | |||| ||||| ||
Sbjct 156347 CGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCTC 156288
Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706
|| |||| ||| |||| |||||| | ||| | |||||| |||| || || ||
Sbjct 156287 CACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTCCCTTGCGCGCAC 156228
Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766
||| || | || | |||| |||| || |||||| || || | || | ||||| ||
Sbjct 156227 CTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATCGCCGTGCCACGG 156168
Query 131767 TTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAAC 131823
|||| || | || | || ||| |||||| ||||| |||| || | || |
Sbjct 156167 CTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATCGACGTACCGTGC 156108
Query 131824 CATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTT 131883
| | |||||||| ||||||| ||| || |||| ||||| | |||| || ||||
Sbjct 156107 CGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCCGTTCGTGCCAGA 156048
Query 131884 AATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTT 131943
||||| | || || || | ||| ||| ||||| || || || || ||| | | ||
Sbjct 156047 GATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCCGACTT 155988
Query 131944 AGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAAT 132003
||||| |||||||| | | || |||| ||||| || || | |||||| ||| ||
Sbjct 155987 GGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCGGACAT 155928
Query 132004 GTCGACTAAAAAGCAAGAGGACAACTG 132030
| | | ||||||||| |||| |||
Sbjct 155927 GGTCAGCAGAAAGCAAGACGACAGCTG 155901
>seq712
Length=12093160
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| |||| |||| ||| | || || || || || || ||||||||| |
Sbjct 3459567 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3459626
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || ||||| || |||||| | ||||||||||| |||||||||||
Sbjct 3459627 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 3459686
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||| || || |||||| |||| | || | || || | || || ||
Sbjct 3459687 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 3459746
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | || ||||| || ||||| || ||||| |||||
Sbjct 3459747 TCAAGGGTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793
>seq490
Length=13136524
Score = 104 bits (114), Expect = 2e-17
Identities = 173/246 (70%), Gaps = 8/246 (3%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | |||| ||| | || || || || || ||||||||||| |
Sbjct 10198965 CCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGAC 10199024
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | || | ||||| ||||| || |||||| | || |||||||| |||||||| ||
Sbjct 10199025 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGG 10199084
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| || || ||||| ||||| |||| | | || | |||||| | |||| || ||
Sbjct 10199085 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGC-TCCAC 10199143
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT-----AGCTGCT 27254
||| || || || | || || ||||| || || || ||||||||||| ||||| |
Sbjct 10199144 TTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATGATTAAGCTG-T 10199202
Query 27255 AAAAAT 27260
||||||
Sbjct 10199203 AAAAAT 10199208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424927843527792
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