Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq391 138 4e-27 seq302 98.7 3e-15 >seq391 Length=2819257 Score = 138 bits (152), Expect = 4e-27 Identities = 363/542 (67%), Gaps = 14/542 (3%) Strand=Plus/Plus Query 254979 TACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAAC 255038 |||| ||| | || |||| |||||| ||| || ||||||||||| || ||| || | Sbjct 156079 TACCGATGCTGCGCGTGTACAACAATACGGCACGGTACGTCGATCAGGGCGGCAATAAGC 156138 Query 255039 GCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTTTT 255095 | ||||| ||||| |||||||||||||||||||||||| ||| |||| ||||| Sbjct 156139 GGCCAGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGATGTGTTTGA---GTTTT 156195 Query 255096 TACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTG 255155 || ||| | || ||||||| |||||| || ||| | ||||| | ||| Sbjct 156196 TAGATCTGAAGAAAAACACCGGCAAGGAGGAGGTGCGCGCAAGGGACATGTTTTACGCGC 156255 Query 255156 TCTGG-TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCAT 255213 ||||| | | | |||||||| |||| |||||||| ||| |||| || ||||| | || Sbjct 156256 TCTGGATACCG-GATCTGTTCATGCAGCGCGTGGAGGCGA-ACGAAACGTGGAGTTTGAT 156313 Query 255214 GTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTA 255273 ||| || || | ||||| | | ||| || ||||| || ||||| || || |||| Sbjct 156314 GTGCCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGTTCGAGAAGTTGTA 156373 Query 255274 TCTGGAGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAA 255333 || || || | ||||| ||| | ||||| || ||| || | | ||| Sbjct 156374 CACGGGTTATGAAAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCGCAGGATCTGTGGTT 156433 Query 255334 CACGATGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-CAC 255391 |||| | || || ||| |||| || || | |||| | | || |||| ||| | Sbjct 156434 TGCGATCAT-CGAATCCCAGGTGGAGACGGGCGTACCGTACATGCTGTACAAGGACGCGT 156492 Query 255392 ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTGTGCACC 255451 || |||| | ||||||| || ||| || || |||| ||||| |||||| Sbjct 156493 GCAATCGCAAAAGC-AACCAACAAAACATCGGCACCATCAAGTGCTCTAACCTTTGCACC 156551 Query 255452 GAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCATCTCG 255511 |||||| | | || |||| | | || ||||| || |||||| |||| || || || Sbjct 156552 GAGATTGTGGAGTACTCGTCGAAGGACGAAGTGGCGGTGTGCAACCTGGCCTCGATTGCG 156611 Query 255512 CT 255513 || Sbjct 156612 CT 156613 >seq302 Length=5740867 Score = 98.7 bits (108), Expect = 3e-15 Identities = 292/440 (66%), Gaps = 13/440 (3%) Strand=Plus/Minus Query 443431 TGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACG 443490 ||||||||||||| | ||||||||||| |||||||||||| ||| ||| | Sbjct 73467 TGGCCTTCTTTGCCGCCTCGGACGGTATCGTGAACGAGAATCTGGTGGAGCGCTTCAGCC 73408 Query 443491 AAATGGTAGTGTACACCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACA 443550 | ||| | || ||||| |||| |||||||| ||| || || ||||||||| Sbjct 73407 AGGAGGTGCAGGTGACGGAGGCTCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAACG 73348 Query 443551 TTCACGCCGAGGTCTACAGTCAGTTGATCAAGACAC-TA-ATTC-CGAAC-GAAGACGAA 443606 | ||| |||| | ||| | | ||||| ||||| || |||| ||| | |||| || Sbjct 73347 TGCACAGCGAGATGTACTCGCTGCTGATC--GACACGTACATTCGCGACCCGAAG--GAG 73292 Query 443607 CAGCGGTCCATCTTCTCATCGTTCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGG 443666 | | || | | ||| || || || || || | | | ||| | |||| Sbjct 73291 CGGGAGTACCTGTTCAACGCGATCGAAACGCTCCCGTGCGTGAAGAAGAAGGCCGACTGG 73232 Query 443667 GCAAAACAGTGGCTCGAACGAGAAA--ATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTG 443724 || | ||| || |||| || | || ||| | ||||||| | || || || | Sbjct 73231 GCGCTGAACTGGATCT--CGAGCAAGCAGGCCAACTTTGGCGAGCGAGTGGTGGCGTTCG 73174 Query 443725 CTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAG 443784 ||| ||||| || | || || || || ||||| || ||||||||||| |||| ||| Sbjct 73173 CTGCCGTCGAGGGCATCTTCTTCAGTGGAAGCTTC-GCGGCCATCTTCTGGCTGAAGAAG 73115 Query 443785 CGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTG 443844 ||||| || |||| |||||||| || ||||| ||||| || |||||||| || Sbjct 73114 CGTGGCCTGATGCCGGGTCTGACGTTCTCGAACGAGTTGATCTCGCGTGACGAGGGACTG 73055 Query 443845 CATTGCGACTTCGCCTGTCT 443864 || || || || ||||| || Sbjct 73054 CACTGTGATTTTGCCTGCCT 73035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588310236197370