Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq368 100 3e-16 seq302 89.7 6e-13 >seq368 Length=3665626 Score = 100 bits (110), Expect = 3e-16 Identities = 187/271 (69%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 168431 GTAAAGATATACCTCGTTTGAGACGC-ATCCTTACCACCCATGAGACGCGTACCAAACTG 168489 || ||||| ||||||| || ||| |||||| ||||| | | |||||||| ||||| Sbjct 2226853 GTGAAGATGTACCTCGGACTAG-CGCTATCCTTGCCACCGGTCAACCGCGTACCGAACTG 2226911 Query 168490 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 168549 ||| | ||| || |||||||| ||||| ||| | ||||| | ||||| ||||| Sbjct 2226912 ACCGCCCGGAAACAGTAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTGAC 2226971 Query 168550 AATCGTGTCCGCG---AGAGAGACTTCACCGTGGTGGTACGCACTCTTCTCTGCGACAAA 168606 ||||| || | || || ||| |||||||||||||| | | || || || | Sbjct 2226972 GATCGT---CGAGCAAAGCGATTGTTCGCCGTGGTGGTACGCGGACATTTCCGCCACCGA 2227028 Query 168607 TGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTACAT 168666 |||||| ||||||||| |||| ||| |||| ||| | |||||| | | ||| Sbjct 2227029 ACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCACGTGAACAG 2227088 Query 168667 AACCTTGCGTTGCGAAGGCTTGAGACCATCC 168697 ||||| || || ||||| || || ||| Sbjct 2227089 CACCTTCCGCTGGCCCGGCTTCAGGCCGTCC 2227119 >seq302 Length=5740867 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 ||||| |||||| | | || || || || ||||| ||||||||| ||| ||| Sbjct 73199 CTTTGGCGAGCGAGTGGTGGCGTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGAAGCTT 73140 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 | || || | ||||| |||||||| || || ||||| ||||| ||||| ||||| Sbjct 73139 CGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGTCTGACGTTCTCGAACGA 73080 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | | ||||| |||||||||||||| ||| || ||||| Sbjct 73079 GTTGATCTCGCGTGACGAGGGACTGCACTGTGATTTTGC 73041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251569897840