Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq490 158 4e-33 seq934 150 5e-31 seq379 95.1 4e-14 seq712 93.3 1e-13 seq302 93.3 1e-13 seq368 91.5 4e-13 >seq490 Length=13136524 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 |||| | ||||| || | | || || ||||| ||||| ||||| || || ||||| | Sbjct 10198957 TTTAAAATCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGT 10199016 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || |||||||| || || ||||| || ||||| ||||| ||||||| Sbjct 10199017 AGTCTGACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGAT 10199076 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || ||||| ||||||||||| ||||| || || || || || | || |||| Sbjct 10199077 CCGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATG 10199136 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| || || | ||||||||||| || || || || || || ||||| Sbjct 10199137 GCTCCACTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191 Score = 93.3 bits (102), Expect = 1e-13 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 235887 TAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCA 235946 || |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| Sbjct 6559654 TACGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCG 6559713 Query 235947 AAACCCAGCATCTCCA 235962 | |||| ||||||||| Sbjct 6559714 ATACCCGGCATCTCCA 6559729 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 6022323 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 6022264 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 6022263 CCCGGCATCTCCA 6022251 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 6546542 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 6546601 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 6546602 CCCGGCATCTCCA 6546614 >seq934 Length=8401807 Score = 150 bits (166), Expect = 5e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||| |||||||||| | || || || | ||||| || || || || || || || || Sbjct 268417 TACTTACCACCACGGAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAG 268476 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || ||||| || || || || || |||||||| ||||| |||||||| Sbjct 268477 TCCGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCC 268536 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || ||||| || || ||||| || || || || ||||| || |||| || || || Sbjct 268537 GGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGC 268596 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || ||||| || | ||||| ||||| |||||||| || ||||||||||| Sbjct 268597 TCGACCTCAAGCGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | | Sbjct 6190809 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 6190750 Query 235950 CCCAGCATCTCCA 235962 ||||||||||||| Sbjct 6190749 CCCAGCATCTCCA 6190737 >seq379 Length=19898295 Score = 95.1 bits (104), Expect = 4e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 235888 AGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAA 235947 |||||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | Sbjct 5540876 AGGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGA 5540817 Query 235948 AACCCAGCATCTCCA 235962 |||| ||||||||| Sbjct 5540816 TACCCGGCATCTCCA 5540802 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 5534697 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 5534756 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 5534757 CCCGGCATCTCCA 5534769 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 13467892 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 13467951 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 13467952 CCCGGCATCTCCA 13467964 >seq712 Length=12093160 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | Sbjct 7337891 GGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGAT 7337950 Query 235949 ACCCAGCATCTCCA 235962 |||| ||||||||| Sbjct 7337951 ACCCGGCATCTCCA 7337964 >seq302 Length=5740867 Score = 93.3 bits (102), Expect = 1e-13 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | Sbjct 4135141 GGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGAT 4135082 Query 235949 ACCCAGCATCTCCA 235962 |||| ||||||||| Sbjct 4135081 ACCCGGCATCTCCA 4135068 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 4218718 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 4218659 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 4218658 CCCGGCATCTCCA 4218646 >seq368 Length=3665626 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 3583363 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 3583422 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 3583423 CCCGGCATCTCCA 3583435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515229821626598