Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq302 134 1e-26 >seq302 Length=5740867 Score = 134 bits (148), Expect = 1e-26 Identities = 466/717 (65%), Gaps = 20/717 (3%) Strand=Plus/Plus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || || || || || ||||| ||| || |||||||| || || | Sbjct 72864 AGCAACCGATCGGCCACGAACTCGATGTACTGCGACATCAGATCGCAGTTCATACCGAGC 72923 Query 4434 AATCTCA-CAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | ||| | || ||||| | |||| ||||| || || || | || || || ||| Sbjct 72924 A-TATCAACCGGGAGCGCCTTCGTCAGGAACTCCTGCTCGATTGCGACCGCATCGCGGAT 72982 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || | | || || | || || | || | || | |||| | || || Sbjct 72983 GATTTCCGTCACGCGCTCCTTCGTCGGCTTCTGCACCAGATAGCGGAACATCAGGCAGGC 73042 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGG 4611 ||||||||| |||| || ||||| | || | |||| ||||| || ||||| | || | Sbjct 73043 AAAATCACAGTGCAGTCCCTCGTCAC-GCGAGATCAACTCGTTCGAGAACGTCAGACCCG 73101 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||| | || | ||| || ||||| || || || || || ||| ||||| |||| Sbjct 73102 GCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGAAGATGC 73161 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-A 4728 | || ||||| || ||||| || | ||| || || | |||| | | || | | Sbjct 73162 CCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAA---GTTGGCCTGCTTGCTCGAGA 73218 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| || | ||||||| || || ||||| |||||||| | || | || ||||| | Sbjct 73219 TCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCGATCGCGTTGA 73278 Query 4789 ATAATTTACT-----TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843 | | | ||| | ||| ||||| |||| || ||||| || || || || Sbjct 73279 ACAGGT-ACTCCCGCTCCTTC----GGGTCGCGAATGTACGTGTCGATCAGCAGCGAGTA 73333 Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903 ||| || || | || || || ||||||||||| ||||| ||||| | ||| || || Sbjct 73334 CATCTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAGCCTCCGT 73393 Query 4904 TACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGC 4963 || || || || | | || | || || | || ||||| || |||||||| ||| Sbjct 73394 CACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGTCCGAGGC 73453 Query 4964 TGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCA 5023 ||||| || |||| || || || || |||| | ||| ||||| || | ||| Sbjct 73454 GGCAAAGAAGGCCAGCACGTGCGAGATGAAGTGACGCTCGCTCGGCTTCAGCGAATCCCA 73513 Query 5024 GTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || || || || | | || || ||||| || ||||| || || |||||||| Sbjct 73514 GTCCTTCATGTCCTTCGAGAGGTCCACCTCTTCCACGGTCCAGAAGGAAGCTTCCGC 73570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427043010891578