Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq391 232 9e-56 seq302 109 8e-19 >seq391 Length=2819257 Score = 232 bits (256), Expect = 9e-56 Identities = 1167/1847 (63%), Gaps = 18/1847 (1%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 ||||| || || || | ||||||||| ||||| || || |||| |||| ||| ||| Sbjct 157492 GCGGGCTTGGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 157433 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 ||||| ||||| ||| || | || || || | || || || | |||||| Sbjct 157432 TGCATTGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 157373 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 ||||||||||| || || | || || ||||| | || || || | ||| ||| Sbjct 157372 TGATCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 157313 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG--GTTTG-TATTTTGAATGGAA 77039 |||| |||||| | | | | || | || | ||| | | || || || ||| Sbjct 157312 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGTTCGATGTTCTGGATCGAA 157253 Query 77040 CCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAA 77099 || | | | ||||| ||||| |||||||| | ||||| | || | | Sbjct 157252 CCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCAGA 157193 Query 77100 ACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAA 77159 | | | || || | || || | ||||| || || |||| || | || |||| Sbjct 157192 TCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAG 157133 Query 77160 ATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCA 77219 | || || || || || | || || ||||| ||||||||||| || || ||||| Sbjct 157132 ACGTTGGACGTGTACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCC 157073 Query 77220 GTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTT 77279 || ||||| || || | || | || | | ||| ||| | || || || || Sbjct 157072 GTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTC 157013 Query 77280 AGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATT 77339 || ||||| ||| || || | ||||| | ||| | ||||| || ||||| Sbjct 157012 AGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATA 156953 Query 77340 CCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCA 77399 || || || | ||||| | || || || || ||||| || | || | || Sbjct 156952 CCCTTGCTCACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCTCG 156893 Query 77400 CAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGT 77459 || || ||||||| || || || || || || || || |||| || |||||| | ||| Sbjct 156892 CAGCTAGCTTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTTGC 156833 Query 77460 GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACT 77519 || || ||| || |||| | | | || || ||||| || | ||||| || Sbjct 156832 GCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACG 156773 Query 77520 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAA 77579 || ||||| || || | || | | | || || || ||||| || | || || | Sbjct 156772 CCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAG 156713 Query 77580 TTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTA 77639 || | ||| ||||| || || | || | || | ||| | || || || || || Sbjct 156712 TTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTC 156653 Query 77640 AGAAAATCAAATCTTCCATCTATA---ACAAACATGTTCAAAGCTATAGATGCTAGATTA 77696 |||||| | | | || || |||||||||| || || || || || || Sbjct 156652 GCGAAATCATACGTACGGTCGGGCTGGACGAACATGTTCAGCGCAATCGAGGCCAGGTTG 156593 Query 77697 CAAACTGCTACCTCATTAGCGTTGGCA--TATTGTATTATCTCGGTACATAGATTACTAC 77754 || || || || || | | | | | || | | |||||||| || || ||| | Sbjct 156592 CACACCGCCACTTCGTC--CTTCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGC 156535 Query 77755 ATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAA 77814 | ||||| ||||| | |||||||||||||| || |||||| | |||||| || || | Sbjct 156534 ACTTGATGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCA 156475 Query 77815 TAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-GCT 77873 | |||| || || || | ||| |||||||| || | ||| | || || || Sbjct 156474 TGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA-GATCCTGCGCC 156416 Query 77874 TTTATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCA 77933 |||| | || | || | ||| ||||||| || || | | || || || Sbjct 156415 TTTACCTGGCGGATGAAGCGGCCCTCCTTTTCATAACCCGTGTACAACTTCTCGAACTCT 156356 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCA-GTCACC 77992 || ||||| ||| ||||||| || || || | ||||||||||| ||| || | Sbjct 156355 TCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCG 156296 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 || ||| || || | ||| || ||||| |||||||| || || ||| | || | Sbjct 156295 TTCG-CCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTCCCT 156237 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112 | | || || || || || || || || ||||| | |||||| | | ||| Sbjct 156236 TGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATCGCC 156177 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 ||||| || || || || || || | | || || || ||||| || |||||||| | Sbjct 156176 GTGCCACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATCGAC 156117 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 || | || || || || || || | || ||| || | | ||||| || |||| || Sbjct 156116 GTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCCGTT 156057 Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCT 78290 || ||||| || || |||| | || || || | | | | | | ||| || || Sbjct 156056 CGTGCCAGAGATGTACGTTCCCTTCGCCCGGATGCAGTGC--ACGTTCAGCCCGATGCCA 155999 Query 78291 CCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTG 78350 || ||| ||| || || || ||||| | |||| || |||||||| ||||| || ||| Sbjct 155998 CCGGCCGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTG 155939 Query 78351 TCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTA 78410 || || |||| | || ||||| || |||| || || | || | || Sbjct 155938 TCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTGGCCGCCGCG 155879 Query 78411 AATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATA 78470 || | ||||| || ||||| ||||| | || || || |||||||| || || || Sbjct 155878 AACATGGTCGGCGAAGCATGGGTAAAGTAACGCTCCGAGAGCAGATTGTACGTCTCGATC 155819 Query 78471 GCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGT 78530 |||| || |||||| || || || | || || ||||||| ||||||||| || Sbjct 155818 GCTGCCTCGATGTCCGTGCCGTGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGC 155759 Query 78531 CTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 78590 || || || |||| || || |||||||| || || |||| ||||| || || Sbjct 155758 CTCTCGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTTGAAGCCG 155699 Query 78591 AAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637 ||||||||||| ||||| | |||||||||||| | |||||||| Sbjct 155698 AAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 155652 >seq302 Length=5740867 Score = 109 bits (120), Expect = 8e-19 Identities = 289/439 (66%), Gaps = 7/439 (2%) Strand=Plus/Plus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 ||||| | || ||||||||||| || || || || || | || || ||||| || Sbjct 73029 AACATCAGGCAGGCAAAATCACAGTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAG 73088 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || ||||| ||||| || ||||| || || ||||| || || |||||||| |||| Sbjct 73089 AACGTCAGACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCA 73148 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311 ||||| ||||| || ||||| || || || | || ||| || | |||| | Sbjct 73149 CTGAAGAAGATGCCCTCGACGGCAGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGC 73208 Query 48312 TTG---TGTATCCACCGTT--GTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTT 48366 ||| ||||| ||| | ||||| || ||||||||||| || || || | |||| Sbjct 73209 TTGCTCGAGATCCA--GTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTT 73266 Query 48367 CTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAA 48426 | || || || || || | | || || || || ||| || || || | | Sbjct 73267 CGATCGCGTTGAACAGGTACTCCCGCTCCTTCGGGTCGCGAATGTACGTGTCGATCAGCA 73326 Query 48427 GACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCG 48486 | ||||| ||| ||| | || || || || |||||||| ||||| || || | | Sbjct 73327 GCGAGTACATCTCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGAG 73386 Query 48487 CTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCAT 48546 | || || | ||| |||||| | || || || ||| |||||| || || || || | Sbjct 73387 CCTCCGTCACCTGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCGTTCACGATACCGT 73446 Query 48547 CACTAGCAGCAAAAAATGC 48565 | || ||||| || || Sbjct 73447 CCGAGGCGGCAAAGAAGGC 73465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694657806866240