Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq391 208 1e-48 seq302 104 3e-17 >seq391 Length=2819257 Score = 208 bits (230), Expect = 1e-48 Identities = 1162/1849 (63%), Gaps = 22/1849 (1%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 || || || || || | ||||||||| ||||| || || |||| |||| ||| ||| Sbjct 157492 GCGGGCTTGGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 157433 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 ||||| || || ||| || |||| || || | || || || | |||||| Sbjct 157432 TGCATTGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 157373 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577 ||||||||||| || || | || || ||||| | || || || | ||| ||| Sbjct 157372 TGATCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 157313 Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTA-----TTTTGAATGG 75632 |||| |||||| | | | | || | || | ||||| || || || | Sbjct 157312 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTA--TTTGTTCGATGTTCTGGATCG 157255 Query 75633 ATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTA 75692 | ||| | | | ||||| ||||| || ||||| | ||||| | ||| | Sbjct 157254 AACCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCA 157195 Query 75693 AAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGT 75752 | | | | || || | || || | ||||| || || |||| || | || ||| Sbjct 157194 GATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGT 157135 Query 75753 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAG 75812 | | || || || || || | || || ||||| ||||||||||| || || |||| Sbjct 157134 AGACGTTGGACGTGTACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAG 157075 Query 75813 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 75872 | |||||||| || || | || | || | | ||| ||| | || || || | Sbjct 157074 CCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCT 157015 Query 75873 TTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAA 75932 | || ||||| ||| || || | ||||| | ||| | ||||| || |||| Sbjct 157014 TCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAA 156955 Query 75933 TTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTT 75992 | || ||||| | ||||| | || || ||||| | || |||| | || | | Sbjct 156954 TACCCTTGCTCACCGGAGATCCTTCGTACGTCTCGTACGGTCCCTCCTGAGCGGCCATCT 156895 Query 75993 CGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT 76052 |||| || || || | |||||| || || || || || || |||| || ||| || | || Sbjct 156894 CGCAGCTAGCTTCCAGCGCACCATAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTTT 156835 Query 76053 GCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAA 76112 |||| || ||| || | || | | | || || ||||| || | ||||| | Sbjct 156834 GCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGA 156775 Query 76113 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAAT 76172 | || ||||| || || | || | | | || || | ||||| || | ||||| Sbjct 156774 CGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGA 156715 Query 76173 AATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTT 76232 | || | || ||||| || || | || | || | ||| | || || || || | Sbjct 156714 AGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCT 156655 Query 76233 TGAGAAAATCAAATTTTCCATCTATC---ACAAACATATTAAGAGCTATAGATGCTAGAT 76289 | |||||| | | | || | || ||||| || || || || || || || | Sbjct 156654 TCGCGAAATCATACGTACGGTCGGGCTGGACGAACATGTTCAGCGCAATCGAGGCCAGGT 156595 Query 76290 TACAAACGGCTACCTCATTAGCATTGGCA--TATTGTATTATCTCCGTGCATAGATTACT 76347 | || || || || || | | | | | || | | ||||| ||||| || ||| Sbjct 156594 TGCACACCGCCACTTCGTC--CTTCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGA 156537 Query 76348 ACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAG 76407 |||||||| || || | |||||||||||||| || || || | |||||| || || Sbjct 156536 GCACTTGATGGTGCCGATGTTTTGTTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAG 156477 Query 76408 AACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTA-G 76466 | |||| || || || | ||| |||||||| || | ||| | || || | Sbjct 156476 CATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA-GATCCTGCG 156418 Query 76467 CTTTTA--TTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAA 76524 | |||| | ||| | | || ||| ||||||| || || ||| || || Sbjct 156417 CCTTTACCTGGCGGAT--GAAGCGGCCCTCCTTTTCATAACCCGTGTACAACTTCTCGAA 156360 Query 76525 TTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTC 76584 || || ||||| ||| |||| || ||||| || | ||| |||||||| |||| Sbjct 156359 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGT 156300 Query 76585 ACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATC 76644 | | ||| || || | ||| || ||||| |||||||| || || ||| | || Sbjct 156299 TTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGTATCCAGAGCGCGTAAAACATGTC 156240 Query 76645 TCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATC 76704 | | | || || || || || || || || ||||||| ||||| | | ||| Sbjct 156239 CCTTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCTAAAAACTCAAACACATC 156180 Query 76705 AGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATC 76764 ||||| || || || || || || | |||| || || ||||| || |||||||| Sbjct 156179 GCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCTGGCCGCTTATTGCCGCCCTGATC 156120 Query 76765 TATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACC 76824 | || | || || || || || || | || ||| || | | ||||| || | || Sbjct 156119 GACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGTACCAACCCGTTCGAAATTCC 156060 Query 76825 ATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT-AGGCCTATTC 76883 || || ||||| || || |||| || || || | | | | || || || | Sbjct 156059 GTTCGTGCCAGAGATGTACGTTCCCTTCGCCCGGATGC-AGTGCACGTTCAGCCCGATGC 156001 Query 76884 CTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATAC 76943 | || ||| || ||||| || || || | |||| ||||| ||||||||||| || | Sbjct 156000 CACCGGCCGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCCTCGATGC 155941 Query 76944 TATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 77003 | || || |||| | || ||||| || |||| || || | || | || Sbjct 155940 TGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTGGCCGCCG 155881 Query 77004 TAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 77063 |||| || || || ||||| || || | || || || |||||||| || || | Sbjct 155880 CGAACATGGTCGGCGAAGCATGGGTAAAGTAACGCTCCGAGAGCAGATTGTACGTCTCGA 155821 Query 77064 TAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 | |||| || || ||| || || || | ||||| ||||||| ||||||||| | Sbjct 155820 TCGCTGCCTCGATGTCCGTGCCGTGGATGCCGATGGCGACGCGCATCAGCATATGCTGCG 155761 Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183 | | || ||| |||| || || |||||||| || || |||| ||||| || | Sbjct 155760 GCCTCTCGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTTGAAGC 155701 Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 | ||||||||||| ||||| | |||||||||||| |||||||||| Sbjct 155700 CGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 155652 >seq302 Length=5740867 Score = 104 bits (114), Expect = 3e-17 Identities = 271/411 (66%), Gaps = 3/411 (1%) Strand=Plus/Plus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| || ||||| || || ||| ||||| || || ||||| || | | | || Sbjct 72872 ATCGGCCACGAACTCGATGTACTGCGACATCAGATCGCAGTTCATACCGAGCATATCAAC 72931 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGT 46583 ||| || |||| ||| || ||||| || || || | ||| ||||| || || || Sbjct 72932 CGGGAGCGCCTTCGTCAGGAACTCCTGCTCGATTGCGACCGCATCGCGGATGATTTCCGT 72991 Query 46584 TACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACA 46643 || |||| | || |||| || || ||||| | || ||||||||||| Sbjct 72992 CACGCGCTCCTTCGTCGGCTTCTGCACCAGATAGCGGAACATCAGGCAGGCAAAATCACA 73051 Query 46644 ATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCC 46703 || || || || || | || || ||||| || || || || || ||||| || || Sbjct 73052 GTGCAGTCCCTCGTCACGCGAGATCAACTCGTTCGAGAACGTCAGACCCGGCATCAGGCC 73111 Query 46704 ACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGC 46763 |||||| || ||||| || || |||||||| |||| ||||| ||||| || || || Sbjct 73112 ACGCTTCTTCAGCCAGAAGATGGCCGCGAAGCTTCCACTGAAGAAGATGCCCTCGACGGC 73171 Query 46764 CGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATGA-ATCCACCTTTGAGC 46820 ||||| || || | || ||| || | |||| | || || ||||| | | || Sbjct 73172 AGCGAACGCCACCACTCGCTCGCCAAAGTTGGCCTGCTTGCTCGAGATCCAGTTCAGCGC 73231 Query 46821 CCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 ||| || ||||| ||||| || || || | ||||| || || || || || Sbjct 73232 CCAGTCGGCCTTCTTCTTCACGCACGGGAGCGTTTCGATCGCGTTGAACAG 73282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712923117813120