Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq712 122 2e-22 seq490 114 3e-20 seq934 107 4e-18 >seq712 Length=12093160 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || ||||||||||| |||| | || | ||||| Sbjct 3459582 AGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCC 3459641 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| |||| || ||| || ||||| || Sbjct 3459642 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCC 3459701 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| |||| | | || || ||| || ||||| ||||| || Sbjct 3459702 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATCGTC 3459761 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || || ||||||| |||||| || Sbjct 3459762 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 3459796 >seq490 Length=13136524 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || | || ||||| || ||||||||||| |||| | ||| | || || Sbjct 5732925 GAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTC 5732866 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| || | |||||| || | || |||||| ||||| || Sbjct 5732865 CTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTC 5732806 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || |||| | |||| || ||| || || ||||| || || Sbjct 5732805 CTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGT 5732746 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 5732745 CTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732713 Score = 113 bits (124), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| ||||| ||||| || ||||| ||||| || | | || | ||||| Sbjct 10198979 GAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGGCCATC 10199038 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| ||||||||||| || | |||||| |||| | ||| |||||||| Sbjct 10199039 TTCCAGCTGCTTT--CCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCCTTA 10199096 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || ||||| || || || |||| | |||| || ||| ||||| || || || Sbjct 10199097 TCCTGAATCTTAGCCTTCACGTTCTCGATAGTGTCCGATGGCTCCACTTCCAGCGTGATG 10199156 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || ||||| ||||||| ||||| Sbjct 10199157 GTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCAT 10199191 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || | || ||||| || ||||||||||| |||| | ||| | || || Sbjct 5732697 GAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTC 5732638 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | |||||| || | || |||||| ||||| || Sbjct 5732637 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTC 5732578 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || |||| | |||| || ||| || || ||||| || || Sbjct 5732577 CTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGT 5732518 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 5732517 CTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 5732485 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || | || ||||| || ||||||||||| |||| | ||| | || || Sbjct 5731123 GAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTC 5731064 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | |||||| || | || |||||| ||||| || Sbjct 5731063 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTC 5731004 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || |||| | |||| || ||| || || ||||| || || Sbjct 5731003 CTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGT 5730944 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||||||||||| |||||| Sbjct 5730943 CTTGCCAGTCAACGTCTTCACGAAGATCTGCAT 5730911 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || | || ||||| || ||||||||||| |||| | ||| | || || Sbjct 5732469 GAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTC 5732410 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | |||||| || | || |||||| ||||| || Sbjct 5732409 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTC 5732350 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || |||| | |||| || ||| || || ||||| || || Sbjct 5732349 CTGGATCTTGGCCTTCACGTTCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGT 5732290 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTG 152101 ||||| || || ||||||||||||| ||| Sbjct 5732289 CTTGCCAGTCAGCGTCTTCACGAAGATCTG 5732260 >seq934 Length=8401807 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||||| ||| || | ||||| || || || || ||||||||||| || | | ||| | Sbjct 268431 GAGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCG 268490 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||| ||||| || | |||||| |||| | |||||| || Sbjct 268491 GCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCCTC 268550 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | |||| || ||| || ||||| || Sbjct 268551 CTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGCGT 268610 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||||||| | |||||| Sbjct 268611 GATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153802084305486