Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28]
1,266 sequences; 216,307,690 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq490 154 1e-32
seq712 149 5e-31
seq934 132 3e-26
>seq490
Length=13136524
Score = 154 bits (170), Expect = 1e-32
Identities = 175/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| |||| ||| | | |||||| || || ||| |||||| ||||| ||||| || |
Sbjct 10198964 TCCACCTCGCAGACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGA 10199023
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| || | || ||||||||||| ||||| ||||||| |||||||||||| | |||
Sbjct 10199024 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 10199083
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288
| |||||||| ||| ||||| |||| | |||| | || ||||| | | ||||
Sbjct 10199084 GATGCCTTCCTTATCCTGAATCTTAGCCTTC-ACGTTCTCGATAGTGTCCGATGGCTCCA 10199142
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
| |||| ||| || |||||||| || |||||||| |||||||||||||||||
Sbjct 10199143 CTTCCAGCGTGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATTTGCATGAT 10199194
Score = 129 bits (142), Expect = 4e-25
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || || |||| ||||||||||| ||||| ||
Sbjct 5732676 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 5732617
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||||||||| || | || ||||| ||| ||||| ||||| ||
Sbjct 5732616 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 5732558
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| || || ||||| || || || |||||||
Sbjct 5732557 TCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCA 5732498
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 5732497 CGAAGATCTGCAT 5732485
Score = 125 bits (138), Expect = 5e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || || |||| ||||||||||| ||||| ||
Sbjct 5731102 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 5731043
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||||||||| || | || ||||| ||| ||||| ||||| ||
Sbjct 5731042 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 5730984
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| || || ||||| || || | |||||||
Sbjct 5730983 TCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAACGTCTTCA 5730924
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 5730923 CGAAGATCTGCAT 5730911
Score = 125 bits (138), Expect = 5e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || || |||| |||||||| || ||||| ||
Sbjct 5732904 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAA 5732845
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||||||||| || | || ||||| ||| ||||| ||||| ||
Sbjct 5732844 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 5732786
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| || || ||||| || || || |||||||
Sbjct 5732785 TCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCA 5732726
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 5732725 CGAAGATCTGCAT 5732713
Score = 123 bits (136), Expect = 2e-23
Identities = 143/190 (75%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || || |||| ||||||||||| ||||| ||
Sbjct 5732448 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 5732389
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||||||||| || | || ||||| ||| ||||| ||||| ||
Sbjct 5732388 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 5732330
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| || || ||||| || || || |||||||
Sbjct 5732329 TCTCAATCGTGTCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCA 5732270
Query 44325 CGAAGATTTG 44334
||||||| ||
Sbjct 5732269 CGAAGATCTG 5732260
>seq712
Length=12093160
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || |||||| ||||| || |||||| ||||||||||| ||||
Sbjct 3459567 CCACCGCGCAGGCGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 3459626
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| ||||| ||||| | |||||||||||| | ||
Sbjct 3459627 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 3459686
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| ||||| ||| |||||| ||||| | | || || || | || || |||
Sbjct 3459687 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 3459746
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | ||||||||||| ||||||||||| || |||||||| |||||
Sbjct 3459747 TCAAGGGTAATCGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 3459793
>seq934
Length=8401807
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| | ||||| |||||| || ||||| ||||||||||| || | || |||
Sbjct 268432 AGTCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGG 268491
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| ||||||||||||| |||||||||||| | || | || |||
Sbjct 268492 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCCGGGGGGATTCCCTCC 268551
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||||| || | || ||||| | || || ||||| | |||
Sbjct 268552 TTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGCGTG 268611
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || ||||| || |||||||| || |||||
Sbjct 268612 ATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 268649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359984845573122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |